Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D18
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118734-1|AAM50594.1|  260|Drosophila melanogaster GH04238p pro...    30   4.9  
AE013599-3716|AAF47088.1|  260|Drosophila melanogaster CG5597-PA...    30   4.9  
AL133503-6|CAB72241.1| 1009|Drosophila melanogaster EG:BACH48C10...    29   8.6  
AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB...    29   8.6  
AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA...    29   8.6  

>AY118734-1|AAM50594.1|  260|Drosophila melanogaster GH04238p
           protein.
          Length = 260

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = +1

Query: 40  DFLNFNLQ*LETMICPIIQIILATTNLLVRKISTIISN--------PLKHKNNKNYIKKT 195
           D  N+ L+     I    Q+    TN+  R   TIISN        P+ ++N + Y   +
Sbjct: 138 DLRNYTLELSHKTIHNETQLNCTVTNVYPRPTITIISNDMDVVKREPMVYENEEGYFDGS 197

Query: 196 MNEVLFYSDDDPD 234
                + +DDDPD
Sbjct: 198 AVVAAYDTDDDPD 210


>AE013599-3716|AAF47088.1|  260|Drosophila melanogaster CG5597-PA
           protein.
          Length = 260

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = +1

Query: 40  DFLNFNLQ*LETMICPIIQIILATTNLLVRKISTIISN--------PLKHKNNKNYIKKT 195
           D  N+ L+     I    Q+    TN+  R   TIISN        P+ ++N + Y   +
Sbjct: 138 DLRNYTLELSHKTIHNETQLNCTVTNVYPRPTITIISNDMDVVKREPMVYENEEGYFDGS 197

Query: 196 MNEVLFYSDDDPD 234
                + +DDDPD
Sbjct: 198 AVVAAYDTDDDPD 210


>AL133503-6|CAB72241.1| 1009|Drosophila melanogaster EG:BACH48C10.4
           protein.
          Length = 1009

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -2

Query: 558 PPQQTFPSKIMAFGSE----ESITINSCSRRT 475
           PP+ T P+ + A GSE     + TI+ C+RRT
Sbjct: 712 PPESTHPAPVAAEGSELPGCSASTIDGCARRT 743


>AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB,
            isoform B protein.
          Length = 1535

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -2

Query: 558  PPQQTFPSKIMAFGSE----ESITINSCSRRT 475
            PP+ T P+ + A GSE     + TI+ C+RRT
Sbjct: 1167 PPESTHPAPVAAEGSELPGCSASTIDGCARRT 1198


>AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA,
            isoform A protein.
          Length = 1395

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -2

Query: 558  PPQQTFPSKIMAFGSE----ESITINSCSRRT 475
            PP+ T P+ + A GSE     + TI+ C+RRT
Sbjct: 1027 PPESTHPAPVAAEGSELPGCSASTIDGCARRT 1058


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,375,710
Number of Sequences: 53049
Number of extensions: 614293
Number of successful extensions: 1633
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)