Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D15
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    30   0.11 
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    24   5.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   7.0  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.2  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   9.2  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 620 EAEKNVRNFSEEQLRAGQGVISLQYG-SNKGATKAESTLVTRDTCKTV 760
           EAE+N RN     LRA +  +S  +  SN G+     T++T  T  +V
Sbjct: 318 EAERNARNAQHLLLRANRLTVSDNHNLSNSGSGNTAGTIITPATTNSV 365


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 612 DRKKLRRTCETSPRSSSGLVR 674
           + +KLRRT E + +SS+ LVR
Sbjct: 337 ETEKLRRTVEQTGKSSAELVR 357


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 282 GMDSDDHRRTREHLRG 329
           G D DD+RRT +  RG
Sbjct: 606 GYDRDDYRRTEKDYRG 621


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 796 HACNKPFKCARLDS 755
           H  +KP KC R DS
Sbjct: 321 HTADKPIKCKRCDS 334


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = +2

Query: 569 SLGRKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGAT 715
           S G   G  G+P I PK +  +V       L++G    ++   S    T
Sbjct: 161 SSGANDGNNGRPEISPKLSPGSVVESVSRSLKSGNPSTAVSSSSTNNNT 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 909,591
Number of Sequences: 2352
Number of extensions: 20050
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)