Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D13
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0044 - 25922298-25923434                                         32   0.73 
10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076     29   5.2  

>01_06_0044 - 25922298-25923434
          Length = 378

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -3

Query: 325 EPNRSTHNRNHSCRTPSHNFCIYLSVRGLCHDATLSVNINTVILN 191
           EP  S  N   SC++  HN C+ LS      D T +  + +V+++
Sbjct: 270 EPKASLVNLPESCKSGMHNMCLALSPAAAADDGTSNAALLSVVVH 314


>10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076
          Length = 748

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 477 VHVR-LRERHCWTPDVICGFLLTASLPTDTKLNLTLLIIKMFLLMQLLTSDSNR 319
           VH   LR RH  +  V  G+L+ + LP D  L++T  ++     ++L+ S  NR
Sbjct: 128 VHAHGLRLRHT-SHLVWIGYLICSKLPDDKSLSITFAVLWFLCFVKLVLSAVNR 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,329,478
Number of Sequences: 37544
Number of extensions: 357248
Number of successful extensions: 842
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)