Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D12
         (945 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   4.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = -2

Query: 869 GGGXNKGXPXGG-GXXGGKXPG 807
           GGG   G P GG G  GG  PG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPG 225



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 869 GGGXNKGXPXGGGXXGG 819
           GGG + G P  GG  GG
Sbjct: 214 GGGGSSGGPGPGGGGGG 230


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 869  GGGXNKGXPXGGGXXGGK 816
            GG   KG   GGG  GGK
Sbjct: 1487 GGSPTKGAGGGGGGGGGK 1504


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 630 PGGNPXNLGEKXQNPPPXXGXKTLPPP 550
           PG  P  +G     PPP  G +  PPP
Sbjct: 96  PGAPPLLMGPNGPLPPPMMGMR--PPP 120


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 820 PPLXPPPXGXPLXXPP 867
           PP  PPP G  L  PP
Sbjct: 530 PPPPPPPGGAVLNIPP 545


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,785
Number of Sequences: 2352
Number of extensions: 5296
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)