Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D12
         (945 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096211-1|AAH96211.1|  309|Homo sapiens PRB3 protein protein.         31   4.6  
BC096210-1|AAH96210.1|  309|Homo sapiens PRB3 protein protein.         31   4.6  
BC096209-1|AAH96209.1|  309|Homo sapiens PRB3 protein protein.         31   4.6  
BC096212-1|AAH96212.1|  162|Homo sapiens PRB3 protein protein.         31   6.1  
BC064553-1|AAH64553.1|  187|Homo sapiens PRH1 protein protein.         31   6.1  
BC006419-1|AAH06419.1|   39|Homo sapiens Unknown (protein for IM...    31   6.1  

>BC096211-1|AAH96211.1|  309|Homo sapiens PRB3 protein protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 630 PGGNPXNLGEKXQNPPPXXGXKTLPPP 550
           P G+P   G K Q PPP  G    PPP
Sbjct: 225 PEGSPSQGGNKPQGPPPHPGKPQGPPP 251


>BC096210-1|AAH96210.1|  309|Homo sapiens PRB3 protein protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 630 PGGNPXNLGEKXQNPPPXXGXKTLPPP 550
           P G+P   G K Q PPP  G    PPP
Sbjct: 225 PEGSPSQGGNKPQGPPPHPGKPQGPPP 251


>BC096209-1|AAH96209.1|  309|Homo sapiens PRB3 protein protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 630 PGGNPXNLGEKXQNPPPXXGXKTLPPP 550
           P G+P   G K Q PPP  G    PPP
Sbjct: 225 PEGSPSQGGNKPQGPPPHPGKPQGPPP 251


>BC096212-1|AAH96212.1|  162|Homo sapiens PRB3 protein protein.
          Length = 162

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 630 PGGNPXNLGEKXQNPPPXXGXKTLPPP 550
           P G P   G K Q PPP  G    PPP
Sbjct: 78  PEGQPPQGGNKPQGPPPHPGKPQGPPP 104


>BC064553-1|AAH64553.1|  187|Homo sapiens PRH1 protein protein.
          Length = 187

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 374 KXXSPPKRGXKKXKXPPXXQKKXFXPPXXGGGGP 273
           K   PP++G ++ + PP  Q K   PP  GG  P
Sbjct: 90  KPQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPP 123


>BC006419-1|AAH06419.1|   39|Homo sapiens Unknown (protein for
           IMAGE:3946309) protein.
          Length = 39

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 808 PGXXPPLXPPPXGXPLXXPPP 870
           P   PPL PPP   PL  PPP
Sbjct: 13  PPPPPPLRPPPPPPPLPPPPP 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,122,683
Number of Sequences: 237096
Number of extensions: 1375281
Number of successful extensions: 9338
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8575
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)