Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_D09
(911 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 190 6e-47
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 9e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 90 8e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 66 9e-10
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 59 1e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 7e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-05
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.022
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.088
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 39 0.20
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 38 0.47
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.47
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.9
UniRef50_Q4RBA3 Cluster: Chromosome 17 SCAF21880, whole genome s... 34 4.4
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.7
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 190 bits (462), Expect = 6e-47
Identities = 91/104 (87%), Positives = 92/104 (88%)
Frame = +2
Query: 485 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFPT 664
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF-R 60
Query: 665 PXRLPDTCPPFSLREAWRFLIAHAVXISVRCRSFAPSWAVCTNP 796
P RLPDTCPPFSLREAWRFLIAHAV ISVRCRSFAPSWAVCTNP
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 93.1 bits (221), Expect = 9e-18
Identities = 44/52 (84%), Positives = 46/52 (88%)
Frame = +2
Query: 503 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 658
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLF 95
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 89.8 bits (213), Expect = 8e-17
Identities = 45/57 (78%), Positives = 46/57 (80%)
Frame = +2
Query: 509 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFPTPXRLP 679
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF-LPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 316 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 414
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -3
Query: 558 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 379
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 66.5 bits (155), Expect = 9e-10
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 643 VRSPVPDPXPLTGYLSAFLPSGSVALSHSSRCXYLSSV 756
+RSPVP PLTGYLSAFLPSGSVALSHSSRC YLSSV
Sbjct: 1 MRSPVPT-LPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -2
Query: 796 GVXAHSPAWSERPTPN*DTYSVSYEKAPRFPK 701
GV A+SPAWSERP P+ DT SVSYEKAPRFPK
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPK 58
Score = 41.1 bits (92), Expect = 0.038
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -3
Query: 822 KRRSGRAERGX-VHTAQLGANDLHRTEIXTA*AMRKRHASRREKGGQVSGKRXGVGNRRA 646
K RS RAERG ++ + + + + +K QVSGKR G NRRA
Sbjct: 18 KGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQG-RNRRA 76
Query: 645 HEGASRGKRLVSL*SCRVSPPLT 577
HEGA+ K SL PPLT
Sbjct: 77 HEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 292 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 450
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 53.6 bits (123), Expect = 7e-06
Identities = 37/77 (48%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +2
Query: 578 VRGGETRQDYK----DTRRFPLEAPSCALLFPTPXRLPDTCPPFSLREAWRFLIAHAVXI 745
VR GETRQD K PL A SC+ P R+P PPFSL + + I
Sbjct: 23 VRSGETRQDLKIITVSDESLPL-ALSCSN--PAVSRIP--VPPFSLAGSVALSHSSHSGI 77
Query: 746 SVRCRSFAPSWAVCTNP 796
S RCRSFAPSWAV NP
Sbjct: 78 SARCRSFAPSWAVSKNP 94
Score = 34.7 bits (76), Expect = 3.3
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = +1
Query: 694 FLPSGSVALSHSSRCXYLSSV*VVRSKLGCVHXPPFSPTAAPF 822
F +GSVALSHSS + PPFSPTAAP+
Sbjct: 61 FSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPY 103
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +2
Query: 452 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 631
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 632 EAPSCALLFP 661
++PS +LLFP
Sbjct: 104 QSPSYSLLFP 113
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.022
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 218 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 340
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.088
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 362 ERGSGRAPNTQTASPRALADSLMQ 291
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 38.7 bits (86), Expect = 0.20
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 796 GVXAHSPAWSERPTPN 749
GV AHSPAWSERPTPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 37.5 bits (83), Expect = 0.47
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -2
Query: 832 RSTEKAQRSG*TGVXAHSPAWSERPTPN*DT 740
R + +A+R GV A+SPAWSERPTP+ DT
Sbjct: 19 RRSSRAER----GVLAYSPAWSERPTPSRDT 45
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.47
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 103 MIRYIDEFGQTTTRMQ 150
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.9
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 585 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 415
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 414 SELIPL 397
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q4RBA3 Cluster: Chromosome 17 SCAF21880, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF21880, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 94
Score = 34.3 bits (75), Expect = 4.4
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 825 PKRRSGRAERGXVHTAQLGAND--LHRTEIXTA*AMRKRHASRREKGGQVSGKRXGVGNR 652
P+RR+GRA R H A+ GA+ RT A + K A R++ S KR G G+R
Sbjct: 7 PRRRAGRARRPARHQAEAGADGRARRRTSPPKAASGGKSEAKTRQE-KPASAKRRGEGDR 65
Query: 651 RA 646
A
Sbjct: 66 AA 67
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.8
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -2
Query: 625 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 446
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 445 DSVD 434
D +D
Sbjct: 304 DHID 307
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.7
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 419 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 598
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 599 QDYKDT 616
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.7
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 425 NTVIHRIRGITQERTCE 475
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,238,342
Number of Sequences: 1657284
Number of extensions: 16826856
Number of successful extensions: 46930
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 44429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46886
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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