Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D09
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0333 + 2404459-2404857,2404917-2405009,2405428-2405522,240...    29   5.1  
06_01_0438 + 3110703-3111945,3112486-3113057                           29   6.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    28   9.0  

>06_01_0333 +
           2404459-2404857,2404917-2405009,2405428-2405522,
           2406146-2406219,2406307-2406395,2406745-2406858
          Length = 287

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +1

Query: 625 PPGSSLVRS-PVPDPXPLTGYLSAFLPSGSVALSHSSRCXYLSSV*VVRSKLGCVHXPPF 801
           PP   L  S P P P PL   L +  P+ ++ L+ +     +SSV  V S+    +  P 
Sbjct: 3   PPSPPLFLSLPSPPPPPLPHLLPSHRPAAALTLAPALSSRRVSSVCPVASQRHSDYFDPR 62

Query: 802 SPTAAPFR 825
           +P   P R
Sbjct: 63  APPPPPPR 70


>06_01_0438 + 3110703-3111945,3112486-3113057
          Length = 604

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 152 HCILVVVCPNSSMYLIMSGSN*PSXKGRSAAAVP 51
           HC + +VC +S+  L++S    P+    ++AA+P
Sbjct: 64  HCFVEIVCADSAGRLLLSAKPRPAPAATTSAALP 97


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +2

Query: 518 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 658
           CWR  +        T  D Q    +    +KD    P + PSC L+F
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIF 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,228,453
Number of Sequences: 37544
Number of extensions: 523486
Number of successful extensions: 1628
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)