Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D09
         (911 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123478-1|BAC85623.1|  124|Homo sapiens protein ( Homo sapiens ...    33   1.9  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.8  

>AK123478-1|BAC85623.1|  124|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41484 fis, clone BRTHA2003030. ).
          Length = 124

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 554 SITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFPTPXRLPDTCPP 694
           ++++  A + G  + Q  K  R+ PL+AP     FP P  LPD  PP
Sbjct: 78  TVSRCPANICGISSTQQGKRWRQKPLQAPE-GTHFPDPVHLPDPRPP 123


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -2

Query: 553 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 437
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,227,094
Number of Sequences: 237096
Number of extensions: 2687638
Number of successful extensions: 12072
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12070
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)