Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D05
         (1388 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239...    29   8.7  

>11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,
            2397417-2397458,2397670-2397723,2397836-2397868,
            2397959-2398039,2398144-2398230,2398313-2398388,
            2398633-2398808,2398912-2399034,2399249-2399361,
            2399521-2399632,2400054-2400273,2401986-2402314,
            2402408-2402713,2403580-2403878,2404079-2404181,
            2404266-2404369,2404840-2404906,2404911-2405076,
            2405241-2405956
          Length = 1157

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 640  GVSFVLKPXXRCGRXNVPD 696
            G+SF+LKP  +C R  VPD
Sbjct: 1124 GISFMLKPEAKCTRVAVPD 1142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,674,181
Number of Sequences: 37544
Number of extensions: 71986
Number of successful extensions: 46
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4373994716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)