Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D03
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0256 + 21887666-21888670                                         30   2.9  
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321...    29   3.9  
07_01_1207 + 11511754-11513865                                         29   5.1  
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744...    29   6.7  

>09_06_0256 + 21887666-21888670
          Length = 334

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 384 WTKNSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKS 500
           W+++  + LL  YE K  + +  K K   W+ IA E+ +
Sbjct: 26  WSESGIVRLLEAYEAKWLLRNRAKLKWSDWVDIAHEVSA 64


>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
            16032434-16032715,16032790-16032948,16033034-16033390,
            16033482-16033622,16033919-16034045,16034121-16034263,
            16034740-16034917,16035019-16035552,16035628-16035812,
            16036551-16036637,16036710-16036850,16036896-16037175,
            16037944-16038020,16038326-16039138,16039292-16039801,
            16039926-16040056,16040192-16040246,16040364-16040564,
            16040640-16040909,16041103-16041184,16041271-16041434,
            16041532-16041690,16041762-16042083,16042158-16042544,
            16042811-16042999,16043233-16043317,16043458-16043753,
            16043862-16043965,16044484-16044513,16044602-16044817,
            16044923-16045540,16045718-16045993,16046619-16046762,
            16046854-16046962,16047291-16047475,16047557-16047670,
            16048348-16048479,16048929-16049249,16049424-16049891,
            16054482-16054547,16054691-16054828,16054917-16055015,
            16057098-16057194,16057661-16057761,16057858-16058085,
            16059175-16059381,16059451-16059571,16059921-16059988,
            16060148-16060213,16060396-16060509,16060949-16061300,
            16063571-16063663,16063764-16063922,16064224-16064287,
            16064385-16064577,16064673-16064710,16065510-16065645,
            16065726-16065914,16065994-16066095,16067660-16067777,
            16067861-16067964,16070338-16070346,16071428-16071475,
            16071581-16071676,16072430-16072533,16073964-16074045,
            16076573-16076601,16076708-16076963
          Length = 4246

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
 Frame = +3

Query: 321  NQNISQQEESDVNEMN--KQNIIWTKNSTIMLLNLYETKIHMLDNPKK--KSKMWISIAE 488
            +++I +Q++S ++  +  KQ+ + +KNS + L +L +  +     P    K   W+S+  
Sbjct: 3141 SESIPKQQQSSLSRQSTLKQSSVPSKNSVLRLADLEKKDMLSYCCPPVGIKQNFWLSVGI 3200

Query: 489  ELKSLNVEVTADQVRWKI 542
            +   L+ ++      WKI
Sbjct: 3201 DASILHTDLNMPIYDWKI 3218


>07_01_1207 + 11511754-11513865
          Length = 703

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 471 WISIAEELKSLNVEVTADQVRWKINALTKKYKDCID 578
           W+ + +E+  L V +  DQV    NAL   Y  C D
Sbjct: 324 WLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKD 359


>05_04_0209 -
           19073147-19074041,19074117-19074163,19074258-19074437,
           19074839-19074955,19075105-19075227,19075391-19075776,
           19076177-19076303,19077140-19077202,19078035-19078086,
           19078189-19080023
          Length = 1274

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 444 DNPKKKSKMWISIAEELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAV 596
           D   + + +W+  AE L++   E T + VRW +     +Y   + +  G V
Sbjct: 105 DQYDRVAAVWLDGAELLRTTTAEPTPEGVRWTVRKDVTRYSALLRSPPGGV 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,116,351
Number of Sequences: 37544
Number of extensions: 337523
Number of successful extensions: 728
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)