Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D03
         (908 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   1.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   1.8  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    24   5.5  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 454 LGLSNICILVSY--KFSNII-VEFFVQMIFCLFISFTSDSSCWL 332
           LGLS+   L+     + N++ ++ ++Q I C F +F+S   C+L
Sbjct: 162 LGLSDTFYLIGQFVAWLNLVDLKIYIQEICCRFFTFSSSLCCFL 205


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 225 DENIHNNVAVLAILDSQPNL--YKPNMPVPTYNHNQNISQQEESDVNEMNKQNIIWTKNS 398
           D N+ N++    +   QP+    +P  P+P  +  Q   QQ++   N+  ++    + + 
Sbjct: 156 DRNLLNSLLAAKVAGGQPSASSRQPPTPLPRRSSAQPQQQQQQQQRNQQEQEQPRASTSH 215

Query: 399 TIML 410
            +ML
Sbjct: 216 AVML 219


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +3

Query: 246 VAVLAILDSQPNLYKPNMPVPTYNHNQNISQQEESDVNEMNK 371
           +A L + D + N +KP      +   ++ ++ E S VNE+ +
Sbjct: 75  LAGLQMYDEKTNTFKPETVPVQHEAYKSFTEVESSKVNELQQ 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,767
Number of Sequences: 2352
Number of extensions: 14933
Number of successful extensions: 149
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)