Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_D02
         (933 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   0.99 
07_01_0710 - 5355277-5355666                                           31   1.3  
06_03_1190 - 28274801-28275163,28275662-28275853,28275965-282760...    29   4.0  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     29   7.0  
02_05_0288 - 27549718-27549940,27550025-27550102,27550282-275506...    29   7.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
03_06_0700 + 35616619-35617069,35619123-35619502                       28   9.2  
01_06_1377 + 36764461-36765339                                         28   9.2  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +3

Query: 516 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPL 665
           CWR  +        T  D Q    +    +KD    P + PSC L+F PL
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPL 332


>07_01_0710 - 5355277-5355666
          Length = 129

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -3

Query: 718 KAPRFPKGERRXRYPV--SGRGRNRRAHEGASRGKRLV 611
           + P  P GE R R     SG GR RR  EGA  G  LV
Sbjct: 88  RGPLAPAGESRERTSAANSGEGRRRRVAEGARDGSGLV 125


>06_03_1190 -
           28274801-28275163,28275662-28275853,28275965-28276088,
           28276177-28276320,28276524-28276640,28277189-28277308,
           28277433-28277521,28277609-28277685,28278250-28278322,
           28278578-28279012,28280247-28280442,28281270-28281490,
           28281591-28281703,28282552-28283146,28283236-28283418,
           28283548-28283712,28283808-28284029
          Length = 1142

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 623 PPGSSLVRSPVPTPAAYRIPXP-PFSLREAWRFLIAH 730
           PP    +   +P PA YR+P   P S  E W+  I H
Sbjct: 112 PPAHRRLNCLIPPPAGYRVPIRWPRSRDEVWKANIPH 148


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 584 WRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPPFSLREA 709
           W  P     Y   PPGSS+   P P P   +   PP+ ++ A
Sbjct: 436 WGQPPPYASYPPPPPGSSMYNPPPPAPG--QATPPPYGVQYA 475


>02_05_0288 -
           27549718-27549940,27550025-27550102,27550282-27550674,
           27550752-27551347,27552232-27552978
          Length = 678

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 623 PPGSSLVRSPVPTPAAYRIPXP-PFSLREAWRFLIAH 730
           P G   +R  VP P+ YR P P P S   AW   + H
Sbjct: 153 PTGRERLRCLVPAPSGYRNPFPWPASRDVAWFANVPH 189


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 296 NESAN---ARGEAVCVLGALPLPRSLTRCAR 379
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_06_0700 + 35616619-35617069,35619123-35619502
          Length = 276

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 632 SSLVRSPVPTPAAYRIPXPPFSLREAWRFLIAHAVGISVRCRSFA 766
           S L  + +P P + R+P  P +    WR  +  A   S RC + A
Sbjct: 13  SPLPGASLPRPVSARVPLLPRASPPTWRLSVGSARARSTRCLAAA 57


>01_06_1377 + 36764461-36765339
          Length = 292

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 623 PPGSSLVRSPVPTPAAYRIPXPP 691
           PP SS    P P P AY  P PP
Sbjct: 164 PPSSSPYYFPPPPPPAYSAPPPP 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,449,965
Number of Sequences: 37544
Number of extensions: 520853
Number of successful extensions: 1798
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)