Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_D02
(933 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 36 0.16
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 36 0.16
AK092711-1|BAC03955.1| 149|Homo sapiens protein ( Homo sapiens ... 31 6.0
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 31 7.9
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 31 7.9
Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory eleme... 31 7.9
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 31 7.9
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 7.9
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 31 7.9
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 31 7.9
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 31 7.9
AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory ele... 31 7.9
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 7.9
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 7.9
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 7.9
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 7.9
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.9
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.9
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -2
Query: 716 SATLPEGRKAXQ--VSGKRQGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 543
S+TL + R + + G +GS+Q S+ G++P + GFA+ + +F +A G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620
Query: 542 GGAYGKTPATRPFYGSWP 489
G + +P + P Y S P
Sbjct: 621 GSSVPPSPYSTPSYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -2
Query: 716 SATLPEGRKAXQ--VSGKRQGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 543
S+TL + R + + G +GS+Q S+ G++P + GFA+ + +F +A G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621
Query: 542 GGAYGKTPATRPFYGSWP 489
G + +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639
>AK092711-1|BAC03955.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ35392 fis, clone SKNSH2000716. ).
Length = 149
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = -2
Query: 551 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 435
RQ G G A R F S P GLL CS LR PDSV
Sbjct: 69 RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>Z94044-3|CAI42353.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 533 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 691
R R P + R S R +P RY PP SP P P P PP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>AL592046-2|CAI39579.1| 1672|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1672
Score = 30.7 bits (66), Expect = 7.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 707 LPEGRKAXQVSG-KRQGSEQESARGSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGG 537
+P+ KA G KR EQ+ A GS T G+ I L G + + D A G
Sbjct: 975 VPKDEKAGTTQGGKRSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSKG 1034
Query: 536 AYGKTPA 516
TPA
Sbjct: 1035 KSKITPA 1041
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 533 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 691
R R P + R S R +P RY PP SP P P P PP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 533 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 691
R R P + R S R +P RY PP SP P P P PP
Sbjct: 587 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 639
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 533 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 691
R R P + R S R +P RY PP SP P P P PP
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 533 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 691
R R P + R S R +P RY PP SP P P P PP
Sbjct: 587 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 639
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 533 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 691
R R P + R S R +P RY PP SP P P P PP
Sbjct: 576 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 628
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +2
Query: 533 RLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRIPXPP 691
R R P + R S R +P RY PP SP P P P PP
Sbjct: 576 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 628
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,544,286
Number of Sequences: 237096
Number of extensions: 2722696
Number of successful extensions: 9054
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9047
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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