Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C23
(916 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 116 6e-27
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 114 1e-26
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 108 9e-25
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 103 4e-23
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 68 2e-12
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 42 2e-04
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 38 0.002
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.92
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 1.2
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 3.7
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 26 6.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 8.6
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 8.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 116 bits (278), Expect = 6e-27
Identities = 62/134 (46%), Positives = 73/134 (54%)
Frame = +1
Query: 151 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNN 330
++GIDLGTTYSCVG F + +VEIIANDQGNRTTP + P+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 331 TIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXKXXXFXPXXXXXXVX 510
TIFDA RLIGR F+D VQ+DMKHWPF V+S G P + V G + F P V
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKG-ETKTFTPEEISSMVL 122
Query: 511 XKNXRKXXXXXXGK 552
K GK
Sbjct: 123 MKMRETAEAYLGGK 136
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 114 bits (275), Expect = 1e-26
Identities = 62/134 (46%), Positives = 71/134 (52%)
Frame = +1
Query: 151 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNN 330
++GIDLGTTYSCVG F + +VEIIANDQGNRTTP + P+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 331 TIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXKXXXFXPXXXXXXVX 510
TIFDA RLIGR F D VQ+DMKHWPF V+ G P I V G + F P V
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKG-ETKTFTPEEISSMVL 122
Query: 511 XKNXRKXXXXXXGK 552
K GK
Sbjct: 123 LKMRESAEAFLGGK 136
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 108 bits (260), Expect = 9e-25
Identities = 52/106 (49%), Positives = 61/106 (57%)
Frame = +1
Query: 151 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNN 330
A+GIDLGTTYSCV V++ VEII NDQG RTTP + P N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 331 TIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXK 468
T+FDA RLIGR +ED Q D+KHWPF V+ + G P I V G K
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEK 113
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 103 bits (247), Expect = 4e-23
Identities = 49/105 (46%), Positives = 62/105 (59%)
Frame = +1
Query: 154 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNNT 333
+GIDLGTTYSCV V ++G+VEIIANDQGNR TP + P NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 334 IFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXK 468
IFD RLIGR F++ T+ D+K +PF +V+D P + V G K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKK 142
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 68.1 bits (159), Expect = 2e-12
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 142 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTP-VLCCVHRHRASHRRCRQEPGGD 318
K P +GIDLGTT SC+ + + ++IAN +G RTTP V+ +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 319 EPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVV 420
P NT F RLIGR F++ VQ D+K P+ +V
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = +1
Query: 139 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGD 318
++ VGID G + + + V ++ +++I N+ NR+TP L +
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 319 EPNNTIFDAXRLIGRXFEDATVQ 387
NT+ RL GR ++D ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIK 85
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +1
Query: 154 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNNT 333
+GI G S + + GK +++AN++GNR P + H + H + +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 334 IFDAXRLIGRXFEDATV 384
+ + L+G+ ++ T+
Sbjct: 87 VTNFRDLLGKSHDELTL 103
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 191 VSSSTGRWRSSPTTRATGPLRSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDV 364
V+ ++G S T+ +T P + AF D + G AK A P+T+ + N+S V
Sbjct: 132 VADASGSKYSVHTSNST-PQSKHNAFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 146 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 241
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 260 VAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 385
+A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1255 LAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 204 REGGDHRQRPG--QQDHSGLMLRSQTPSVSSEMPPRTR 311
+E D +Q+P QQ+H L R+Q +S P+TR
Sbjct: 228 QETQDDKQKPKTTQQEHYNLRNRNQATITNSNSKPQTR 265
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 69 PSIAHVC*VVLRTSNKN*LKIQNGKSTRSRNRSGYHVLLRWCLPARE 209
P+I H + +S K+ +NGK T +R +S + W P++E
Sbjct: 460 PAIPHA--YIADSSTKS--SYRNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 296 AAKNQVAMNPTTQYSMPNVSSDVSSKML 379
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,372,240
Number of Sequences: 5004
Number of extensions: 40658
Number of successful extensions: 147
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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