Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C23
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 127 1e-29
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 127 1e-29
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 119 3e-27
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 119 3e-27
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 118 4e-27
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 110 2e-24
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 110 2e-24
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 108 5e-24
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 79 4e-15
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 79 4e-15
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 62 5e-10
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 62 5e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 54 2e-07
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 42 8e-04
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 32 0.66
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 29 3.5
AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical ... 29 3.5
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 28 8.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 127 bits (307), Expect = 1e-29
Identities = 64/110 (58%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = +1
Query: 136 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGG 315
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTP +
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 316 DEPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXG-XPKIXVTXXG 462
P+NT+FDA RLIGR F+D VQ+DMKHWPF V+S G PK+ V G
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKG 110
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 127 bits (307), Expect = 1e-29
Identities = 64/110 (58%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = +1
Query: 136 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGG 315
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTP +
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 316 DEPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXG-XPKIXVTXXG 462
P+NT+FDA RLIGR F+D VQ+DMKHWPF V+S G PK+ V G
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKG 110
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 119 bits (287), Expect = 3e-27
Identities = 55/111 (49%), Positives = 70/111 (63%)
Frame = +1
Query: 136 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGG 315
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTP ++
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 316 DEPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXK 468
P NT+FDA RLIGR F+++TVQ+D KHWPF V G P I V G K
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEK 111
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 119 bits (287), Expect = 3e-27
Identities = 55/111 (49%), Positives = 70/111 (63%)
Frame = +1
Query: 136 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGG 315
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTP ++
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 316 DEPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXK 468
P NT+FDA RLIGR F+++TVQ+D KHWPF V G P I V G K
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEK 111
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 118 bits (285), Expect = 4e-27
Identities = 54/111 (48%), Positives = 70/111 (63%)
Frame = +1
Query: 136 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGG 315
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTP ++
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 316 DEPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXK 468
P NT+FDA RLIGR F++ TVQ+D+KHWPF V G P + V G K
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEK 111
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 110 bits (264), Expect = 2e-24
Identities = 58/123 (47%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Frame = +1
Query: 154 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASH--RRCRQEPGGDEPN 327
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TP + + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 328 NTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXKXXXFXPXXXXXXV 507
NTIFDA RLIGR + D TVQAD+KHWPF V+ P + V G F P V
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEV-KVGSDNKQFTPEEVSAMV 154
Query: 508 XXK 516
K
Sbjct: 155 LVK 157
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 110 bits (264), Expect = 2e-24
Identities = 58/123 (47%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Frame = +1
Query: 154 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASH--RRCRQEPGGDEPN 327
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TP + + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 328 NTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXKXXXFXPXXXXXXV 507
NTIFDA RLIGR + D TVQAD+KHWPF V+ P + V G F P V
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEV-KVGSDNKQFTPEEVSAMV 154
Query: 508 XXK 516
K
Sbjct: 155 LVK 157
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 108 bits (260), Expect = 5e-24
Identities = 57/123 (46%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Frame = +1
Query: 154 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASH--RRCRQEPGGDEPN 327
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TP + + P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 328 NTIFDAXRLIGRXFEDATVQADMKHWPFXVVSDXGXPKIXVTXXGXKXXXFXPXXXXXXV 507
NTIFDA RLIGR + + TVQ D+KHWPF +V P + V G + F P V
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEV-KVGSETKQFTPEEVSAMV 151
Query: 508 XXK 516
K
Sbjct: 152 LTK 154
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 79.0 bits (186), Expect = 4e-15
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +1
Query: 151 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNN 330
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTP + V + + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 331 TIFDAXRLIGRXFEDATVQADMKHWPFXV-VSDXGXPKIXV 450
++FD R+IGR ++D +Q DM WPF V D G P + +
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI 102
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 79.0 bits (186), Expect = 4e-15
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +1
Query: 151 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNN 330
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTP + V + + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 331 TIFDAXRLIGRXFEDATVQADMKHWPFXV-VSDXGXPKIXV 450
++FD R+IGR ++D +Q DM WPF V D G P + +
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI 102
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 62.1 bits (144), Expect = 5e-10
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +1
Query: 142 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTP--VLCCVHRHRASHRRCRQEPGG 315
K +GIDLGTT SCV + + ++I N +G RTTP V R +++
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 316 DEPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVV 420
+ NT+F RLIGR +ED VQ D+K P+ +V
Sbjct: 90 NSA-NTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 62.1 bits (144), Expect = 5e-10
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +1
Query: 142 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTP--VLCCVHRHRASHRRCRQEPGG 315
K +GIDLGTT SCV + + ++I N +G RTTP V R +++
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 316 DEPNNTIFDAXRLIGRXFEDATVQADMKHWPFXVV 420
+ NT+F RLIGR +ED VQ D+K P+ +V
Sbjct: 90 NSA-NTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 53.6 bits (123), Expect = 2e-07
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = +1
Query: 127 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTP-VLCCVHRHRASHR 291
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ P V+ +
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 292 RCRQEPGGDEPNNTIFDAXRLIGRXFE--DATVQADMKHWPFXVVSD 426
E P TI+DA R IGR FE + +D K +PF + D
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLD 131
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/89 (28%), Positives = 36/89 (40%)
Frame = +1
Query: 154 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPVLCCVHRHRASHRRCRQEPGGDEPNNT 333
+G D+G +GV + G +E+I ND TP S ++ NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 334 IFDAXRLIGRXFEDATVQADMKHWPFXVV 420
+ + LIGR F D Q + P VV
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVV 92
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 268 HRHRASHRR--CRQEPGGDEPNNTIFDAXRLI 357
H+HR SHR Q+ GDE NN + DA R +
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSV 378
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -2
Query: 279 SVSVNAT*DRSGPVALVVG---DDLHLPVLEDTNARVRGTQIDSYCGCFCHFVFLISSCY 109
S+ T +SG V ++VG D + +P++E V I Y C+ + LISS
Sbjct: 253 SIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRYVNCYPTAIELISSGK 312
Query: 108 LFLKQLSK 85
L L L++
Sbjct: 313 LNLSGLTR 320
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/50 (22%), Positives = 28/50 (56%)
Frame = +2
Query: 242 GPLRSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCKP 391
G +++V D +++IG+ + + T+Y++ + SS+++L +P
Sbjct: 16 GLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical
protein F15E6.9 protein.
Length = 664
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 240 VALVVGDDLHLPVLEDTNARVRGTQIDSYCGCFCHFVFLISSCYLFLKQLSKRAR 76
V ++ DD+HL E+ ++ +QI CF L+ ++ Q SK A+
Sbjct: 337 VRYLLVDDIHLNFCENFKVKITLSQILQNFNCFAQIFSLLKQIFINFFQASKEAQ 391
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 194 SSSTGRWRSSPTTRATGPLRSYVAFTDTERLIGDAAKNQVAMNPTTQ 334
SSST S+P++ +T +S T+TE + + +V N ++
Sbjct: 83 SSSTSNTNSTPSSSSTSSKKSTEGMTETETMTASIEQEKVIQNEESE 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,798,166
Number of Sequences: 27780
Number of extensions: 259309
Number of successful extensions: 794
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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