Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C22
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   1.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   4.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 604 TDEKSDEDKMNVDEPVDSPEKNVDMTILSTTRXHVGXLXN 723
           TDE+     +  +E +D     ++ +ILS  R + G L N
Sbjct: 325 TDERGRSITLTENEGIDILGNMIESSILSPNRTYYGDLHN 364


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 610 EKSDEDKMNVDEPVDSPEKNVDMTIL 687
           E SD+D    D  V   EKN D+ IL
Sbjct: 568 EASDKDPEMYDRVVALREKNPDLKIL 593


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -2

Query: 724 HXSAXQHVDESYLKLSCLHFFLDY--PLVHQHSFYLHRSFHLCHSDHF 587
           H      +  S LK   +   +DY  PLV   +  L RS+H   S H+
Sbjct: 753 HGPTTAPMGSSILKRLGIDESVDYTKPLVDAQTMNLLRSYHQQQSHHY 800


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 134 YLYNISIVLITHSTQLCIQQHDELL 60
           Y     I  +T  T+  I QHD+LL
Sbjct: 488 YPNRTQITEVTQQTEPSIYQHDQLL 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,097
Number of Sequences: 336
Number of extensions: 2508
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)