Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C22
         (893 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   1.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   5.4  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    23   9.5  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +1

Query: 496 KLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDE 645
           K V +  +   ++NS + K  + +++    K +  D   K+DE K  +DE
Sbjct: 284 KQVAIGQRSTDEINSLEEKTERLEDTISKQKRELMDALAKADERKTELDE 333


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 302 VIFPLNPSRRRLGKESFRI 358
           +IF   P RR LGK+ +R+
Sbjct: 792 IIFAPMPGRRELGKQVYRV 810


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 523 KQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDE 645
           +  +N   +  +++ +  DL     +   EKSDED +  +E
Sbjct: 253 RDTINYRVKNNVQRNDFVDLLIKMMSKDGEKSDEDSLTFNE 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,737
Number of Sequences: 2352
Number of extensions: 9482
Number of successful extensions: 63
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)