Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C22
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 35 0.35
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 35 0.35
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 35 0.35
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 35 0.35
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 35 0.35
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 35 0.35
BC101685-1|AAI01686.1| 402|Homo sapiens chromosome 6 open readi... 33 1.1
BC101681-1|AAI01682.1| 402|Homo sapiens chromosome 6 open readi... 33 1.1
BC038240-1|AAH38240.1| 402|Homo sapiens chromosome 6 open readi... 33 1.1
AM177179-1|CAJ45483.1| 1621|Homo sapiens kinesin-like protein KI... 33 1.1
AL390721-1|CAC69824.1| 402|Homo sapiens protein ( Human DNA seq... 33 1.1
AF450487-1|AAP97680.1| 1662|Homo sapiens kinesin-like protein KI... 33 1.1
AF155117-1|AAD42883.1| 633|Homo sapiens NY-REN-62 antigen protein. 33 1.1
AB051495-1|BAB21799.2| 1657|Homo sapiens KIAA1708 protein. 33 1.1
L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 33 1.8
AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. 33 1.8
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 33 1.8
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 33 1.8
BC005125-1|AAH05125.1| 688|Homo sapiens NOL10 protein protein. 32 2.4
AK074895-1|BAC11274.1| 796|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK027612-1|BAB55231.1| 708|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK024137-1|BAB14836.1| 638|Homo sapiens protein ( Homo sapiens ... 32 2.4
AC007314-1|AAK52071.2| 579|Homo sapiens unknown protein. 32 2.4
AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein. 32 2.4
AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to... 32 2.4
BC146802-1|AAI46803.1| 788|Homo sapiens ZMYND8 protein protein. 32 3.2
X64229-1|CAA45536.1| 375|Homo sapiens putative oncogene protein. 31 4.3
BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix... 31 4.3
BC035259-1|AAH35259.1| 375|Homo sapiens DEK oncogene (DNA bindi... 31 4.3
BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix... 31 4.3
BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix... 31 4.3
AL031774-1|CAI20082.2| 375|Homo sapiens DEK oncogene (DNA bindi... 31 4.3
AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related matrix-... 31 4.3
AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related matrix-... 31 4.3
AK000059-1|BAA90916.1| 576|Homo sapiens protein ( Homo sapiens ... 31 7.5
X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for ... 30 9.9
U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin pro... 30 9.9
U25435-1|AAB07788.1| 727|Homo sapiens CTCF protein. 30 9.9
EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box... 30 9.9
EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box... 30 9.9
BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box... 30 9.9
BT009915-1|AAP88917.1| 727|Homo sapiens CCCTC-binding factor (z... 30 9.9
BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box... 30 9.9
BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box... 30 9.9
BC090866-1|AAH90866.1| 582|Homo sapiens zinc finger protein 326... 30 9.9
BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box... 30 9.9
BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box... 30 9.9
BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box... 30 9.9
BC014267-1|AAH14267.1| 727|Homo sapiens CCCTC-binding factor (z... 30 9.9
BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box... 30 9.9
AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group pro... 30 9.9
AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box... 30 9.9
AK131079-1|BAC85129.1| 426|Homo sapiens FLJ00276 protein protein. 30 9.9
AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeat... 30 9.9
AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeat... 30 9.9
AF145477-1|AAF31318.1| 727|Homo sapiens transcriptional repress... 30 9.9
AB209793-1|BAD93030.1| 443|Homo sapiens CCCTC-binding factor (z... 30 9.9
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 481 VNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDS 657
V+P VKL D +K+++ + K+K ++K D K ++ +K EDKM P+
Sbjct: 655 VDPKVKLKDGLVRKEKEKHKDKKKD-REKGKKDKDKREKEKVKDKGREDKMKAPAPPLVL 713
Query: 658 PEKNVDMTILS 690
P K + + + S
Sbjct: 714 PPKELALPLFS 724
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 481 VNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDS 657
V+P VKL D +K+++ + K+K ++K D K ++ +K EDKM P+
Sbjct: 598 VDPKVKLKDGLVRKEKEKHKDKKKD-REKGKKDKDKREKEKVKDKGREDKMKAPAPPLVL 656
Query: 658 PEKNVDMTILS 690
P K + + + S
Sbjct: 657 PPKELALPLFS 667
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 481 VNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDS 657
V+P VKL D +K+++ + K+K ++K D K ++ +K EDKM P+
Sbjct: 598 VDPKVKLKDGLVRKEKEKHKDKKKD-REKGKKDKDKREKEKVKDKGREDKMKAPAPPLVL 656
Query: 658 PEKNVDMTILS 690
P K + + + S
Sbjct: 657 PPKELALPLFS 667
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 481 VNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDS 657
V+P VKL D +K+++ + K+K ++K D K ++ +K EDKM P+
Sbjct: 598 VDPKVKLKDGLVRKEKEKHKDKKKD-REKGKKDKDKREKEKVKDKGREDKMKAPAPPLVL 656
Query: 658 PEKNVDMTILS 690
P K + + + S
Sbjct: 657 PPKELALPLFS 667
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 481 VNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDS 657
V+P VKL D +K+++ + K+K ++K D K ++ +K EDKM P+
Sbjct: 576 VDPKVKLKDGLVRKEKEKHKDKKKD-REKGKKDKDKREKEKVKDKGREDKMKAPAPPLVL 634
Query: 658 PEKNVDMTILS 690
P K + + + S
Sbjct: 635 PPKELALPLFS 645
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 481 VNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDS 657
V+P VKL D +K+++ + K+K ++K D K ++ +K EDKM P+
Sbjct: 598 VDPKVKLKDGLVRKEKEKHKDKKKD-REKGKKDKDKREKEKVKDKGREDKMKAPAPPLVL 656
Query: 658 PEKNVDMTILS 690
P K + + + S
Sbjct: 657 PPKELALPLFS 667
>BC101685-1|AAI01686.1| 402|Homo sapiens chromosome 6 open reading
frame 194 protein.
Length = 402
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNV 639
KKK+K S+KRK K +S N ++DT+ SD+DK V
Sbjct: 186 KKKRKNKSSKRKHRKYSDSDS---NSESDTNSDSDDDKKRV 223
>BC101681-1|AAI01682.1| 402|Homo sapiens chromosome 6 open reading
frame 194 protein.
Length = 402
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNV 639
KKK+K S+KRK K +S N ++DT+ SD+DK V
Sbjct: 186 KKKRKNKSSKRKHRKYSDSDS---NSESDTNSDSDDDKKRV 223
>BC038240-1|AAH38240.1| 402|Homo sapiens chromosome 6 open reading
frame 194 protein.
Length = 402
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNV 639
KKK+K S+KRK K +S N ++DT+ SD+DK V
Sbjct: 186 KKKRKNKSSKRKHRKYSDSDS---NSESDTNSDSDDDKKRV 223
>AM177179-1|CAJ45483.1| 1621|Homo sapiens kinesin-like protein
KIF21A variant protein.
Length = 1621
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 493 VKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDK 630
++++D+A K +KL KRK+ +KK S K D DTD++ E+K
Sbjct: 535 IEIIDLAKKDLEKL---KRKEKRKKKSV-AGKEDNTDTDQEKKEEK 576
>AL390721-1|CAC69824.1| 402|Homo sapiens protein ( Human DNA
sequence from clone RP11-424I5 on chromosome 6 Contains
a novel gene, ESTs, STSs, GSSs and a CpG island. ).
Length = 402
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNV 639
KKK+K S+KRK K +S N ++DT+ SD+DK V
Sbjct: 186 KKKRKNKSSKRKHRKYSDSDS---NSESDTNSDSDDDKKRV 223
>AF450487-1|AAP97680.1| 1662|Homo sapiens kinesin-like protein KIF2
protein.
Length = 1662
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 493 VKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDK 630
++++D+A K +KL KRK+ +KK S K D DTD++ E+K
Sbjct: 536 IEIIDLAKKDLEKL---KRKEKRKKKSV-AGKEDNTDTDQEKKEEK 577
>AF155117-1|AAD42883.1| 633|Homo sapiens NY-REN-62 antigen protein.
Length = 633
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 493 VKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDK 630
++++D+A K +KL KRK+ +KK S K D DTD++ E+K
Sbjct: 584 IEIIDLAKKDLEKL---KRKEKRKKKSV-AGKEDNTDTDQEKKEEK 625
>AB051495-1|BAB21799.2| 1657|Homo sapiens KIAA1708 protein.
Length = 1657
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 493 VKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDK 630
++++D+A K +KL KRK+ +KK S K D DTD++ E+K
Sbjct: 531 IEIIDLAKKDLEKL---KRKEKRKKKSV-AGKEDNTDTDQEKKEEK 572
>L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein.
Length = 403
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/45 (28%), Positives = 30/45 (66%)
Frame = +1
Query: 511 AWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDE 645
A++ K K NSAK++ +K + S + ++++ DE+ +E++ + D+
Sbjct: 359 AYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK 403
>AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein.
Length = 181
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/45 (28%), Positives = 30/45 (66%)
Frame = +1
Query: 511 AWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDE 645
A++ K K NSAK++ +K + S + ++++ DE+ +E++ + D+
Sbjct: 137 AYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK 181
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/45 (28%), Positives = 30/45 (66%)
Frame = +1
Query: 511 AWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDE 645
A++ K K NSAK++ +K + S + ++++ DE+ +E++ + D+
Sbjct: 835 AYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK 879
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/45 (28%), Positives = 30/45 (66%)
Frame = +1
Query: 511 AWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDE 645
A++ K K NSAK++ +K + S + ++++ DE+ +E++ + D+
Sbjct: 799 AYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDDK 843
>BC005125-1|AAH05125.1| 688|Homo sapiens NOL10 protein protein.
Length = 688
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 478 IVNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTD--EKSDEDKMNVDE 645
++NP V ++ K+K+KL +++++++K + P+ +D + E SD++K V+E
Sbjct: 505 LLNPLVS--KISEKRKKKLRLLEQQELREKEEEEEPEGKPSDAESSESSDDEKAWVEE 560
>AK074895-1|BAC11274.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ90414 fis, clone NT2RP3000125, similar to
RETINOBLASTOMA BINDING PROTEIN 2. ).
Length = 796
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 547 RKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDM 678
RK+ +K +D +D +D+D++ DED + ++ D K D+
Sbjct: 51 RKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDI 94
>AK027612-1|BAB55231.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ14706 fis, clone NT2RP3000596, weakly similar to
TRICHOHYALIN. ).
Length = 708
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 547 RKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDM 678
RK+ +K +D +D +D+D++ DED + ++ D K D+
Sbjct: 585 RKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDI 628
>AK024137-1|BAB14836.1| 638|Homo sapiens protein ( Homo sapiens
cDNA FLJ14075 fis, clone HEMBB1001905, weakly similar to
TRICHOHYALIN. ).
Length = 638
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 478 IVNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTD--EKSDEDKMNVDE 645
++NP V ++ K+K+KL +++++++K + P+ +D + E SD++K V+E
Sbjct: 455 LLNPLVS--KISEKRKKKLRLLEQQELREKEEEEEPEGKPSDAESSESSDDEKAWVEE 510
>AC007314-1|AAK52071.2| 579|Homo sapiens unknown protein.
Length = 579
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 478 IVNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTD--EKSDEDKMNVDE 645
++NP V ++ K+K+KL +++++++K + P+ +D + E SD++K V+E
Sbjct: 396 LLNPLVS--KISEKRKKKLRLLEQQELREKEEEEEPEGKPSDAESSESSDDEKAWVEE 451
>AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein.
Length = 2142
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 547 RKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDM 678
RK+ +K +D +D +D+D++ DED + ++ D K D+
Sbjct: 1262 RKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDI 1305
>AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to zinc
finger domain 2B protein.
Length = 1972
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 547 RKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDM 678
RK+ +K +D +D +D+D++ DED + ++ D K D+
Sbjct: 1092 RKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDQKGKKTDI 1135
>BC146802-1|AAI46803.1| 788|Homo sapiens ZMYND8 protein protein.
Length = 788
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +1
Query: 556 IKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
++ +S D K+D +D++ SD+++ + DEP D+ +K
Sbjct: 579 VEHSDSEDSEKSDSSDSEYISDDEQKSKDEPEDTEDK 615
>X64229-1|CAA45536.1| 375|Homo sapiens putative oncogene protein.
Length = 375
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIK----KKNSTDLPKNDQNDTDEKSDEDKMNVDEPV 651
K KQK S +K +K KK + K +QN + ++S+ + + DEP+
Sbjct: 264 KPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPL 312
>BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 541 AKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSTT 696
AK+K KK ST K+ + +E+ ++ ++DEP SP NV+ L T
Sbjct: 311 AKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEP--SPVPNVEEVTLPKT 360
>BC035259-1|AAH35259.1| 375|Homo sapiens DEK oncogene (DNA binding)
protein.
Length = 375
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIK----KKNSTDLPKNDQNDTDEKSDEDKMNVDEPV 651
K KQK S +K +K KK + K +QN + ++S+ + + DEP+
Sbjct: 264 KPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPL 312
>BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1214
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 541 AKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSTT 696
AK+K KK ST K+ + +E+ ++ ++DEP SP NV+ L T
Sbjct: 311 AKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEP--SPVPNVEEVTLPKT 360
>BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 541 AKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSTT 696
AK+K KK ST K+ + +E+ ++ ++DEP SP NV+ L T
Sbjct: 311 AKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEP--SPVPNVEEVTLPKT 360
>AL031774-1|CAI20082.2| 375|Homo sapiens DEK oncogene (DNA binding)
protein.
Length = 375
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIK----KKNSTDLPKNDQNDTDEKSDEDKMNVDEPV 651
K KQK S +K +K KK + K +QN + ++S+ + + DEP+
Sbjct: 264 KPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPL 312
>AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1156
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 541 AKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSTT 696
AK+K KK ST K+ + +E+ ++ ++DEP SP NV+ L T
Sbjct: 316 AKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEP--SPVPNVEEVTLPKT 365
>AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1164
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 541 AKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSTT 696
AK+K KK ST K+ + +E+ ++ ++DEP SP NV+ L T
Sbjct: 323 AKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEP--SPVPNVEEVTLPKT 372
>AK000059-1|BAA90916.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ20052 fis, clone COL00777. ).
Length = 576
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 493 VKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDK 630
++++D+A K +KL KRK+ +KK S K D DTD++ + K
Sbjct: 535 IEIIDLAKKDLEKL---KRKEKRKKKSV-AGKEDNTDTDQEKKKKK 576
>X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for
high mobility group-1 protein (HMG-1). ).
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin
protein HMG1 protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>U25435-1|AAB07788.1| 727|Homo sapiens CTCF protein.
Length = 727
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 KKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDSPE 663
KK K ++ + KK++S+D +N + D D+ DE++ V+ EP P+
Sbjct: 592 KKSKRGRKRKMRSKKEDSSD-SENAEPDLDDNEDEEEPAVEIEPEPEPQ 639
>EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box 1
protein protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>BT009915-1|AAP88917.1| 727|Homo sapiens CCCTC-binding factor (zinc
finger protein) protein.
Length = 727
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 KKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDSPE 663
KK K ++ + KK++S+D +N + D D+ DE++ V+ EP P+
Sbjct: 592 KKSKRGRKRKMRSKKEDSSD-SENAEPDLDDNEDEEEPAVEIEPEPEPQ 639
>BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>BC090866-1|AAH90866.1| 582|Homo sapiens zinc finger protein 326
protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.9
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 556 IKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPE 663
+K +NS ++ + Q+ E +ED+ +DEP++ E
Sbjct: 466 VKGENSFEIQDHSQDQQIEGDEEDEEKIDEPIEEEE 501
>BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>BC014267-1|AAH14267.1| 727|Homo sapiens CCCTC-binding factor (zinc
finger protein) protein.
Length = 727
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 KKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDSPE 663
KK K ++ + KK++S+D +N + D D+ DE++ V+ EP P+
Sbjct: 592 KKSKRGRKRKMRSKKEDSSD-SENAEPDLDDNEDEEEPAVEIEPEPEPQ 639
>BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group
protein 1 protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 511 AWKKKQKLNSAKR---KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEK 666
A++ K K ++AK+ K K K + ++++++ DE+ +ED+ + DE D ++
Sbjct: 161 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
>AK131079-1|BAC85129.1| 426|Homo sapiens FLJ00276 protein protein.
Length = 426
Score = 30.3 bits (65), Expect = 9.9
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Frame = -2
Query: 694 SYLKLSCLHFFLDYPLVHQHSFYLH---RSFHLCHSDHFWVGLLNSFFLFAFFWHCSIFV 524
SYL L +H L P + H +LH R HLCH GL S+ F H +
Sbjct: 188 SYLGLRLIHLGLHLPHLGLHLCHLHLSLRGLHLCHP-----GLYLSYLGFHLI-HLGFHL 241
Query: 523 FSSKQHQPI*RTGLQFCHRLTFFSSLYFHR 434
H P GL H L FH+
Sbjct: 242 IHLGLHLP--HLGLYLSHLGLHLPHLGFHQ 269
>AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 2 protein.
Length = 2617
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTI 684
K++QK + ++ K K +++LP+ D DE+ +++ + + P++ P TI
Sbjct: 1464 KEEQKRKQEEDEENKPKENSELPE----DEDEEENDEDVEQEVPIEPPSATTTTTI 1515
>AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 1 protein.
Length = 2542
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +1
Query: 517 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTI 684
K++QK + ++ K K +++LP+ D DE+ +++ + + P++ P TI
Sbjct: 1464 KEEQKRKQEEDEENKPKENSELPE----DEDEEENDEDVEQEVPIEPPSATTTTTI 1515
>AF145477-1|AAF31318.1| 727|Homo sapiens transcriptional repressor
CTCF protein.
Length = 727
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 KKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDSPE 663
KK K ++ + KK++S+D +N + D D+ DE++ V+ EP P+
Sbjct: 592 KKSKRGRKRKMRSKKEDSSD-SENAEPDLDDNEDEEEPAVEIEPEPEPQ 639
>AB209793-1|BAD93030.1| 443|Homo sapiens CCCTC-binding factor (zinc
finger protein) variant protein.
Length = 443
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 KKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD-EPVDSPE 663
KK K ++ + KK++S+D +N + D D+ DE++ V+ EP P+
Sbjct: 308 KKSKRGRKRKMRSKKEDSSD-SENAEPDLDDNEDEEEPAVEIEPEPEPQ 355
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,998,973
Number of Sequences: 237096
Number of extensions: 1311051
Number of successful extensions: 5214
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4780
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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