Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C19
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0033 + 27820563-27823482,27823593-27823996                       31   0.90 
07_03_0947 - 22805419-22805571,22805736-22805966,22806161-228063...    30   2.8  

>11_08_0033 + 27820563-27823482,27823593-27823996
          Length = 1107

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +3

Query: 264 DTIRSIVQNSHYKRLADLYLDNNSIAAVKELEGSEWFSTFRVLSLRGNYLK-QIPVYAFD 440
           D I S + N    +L  L L +N I+    +E    +S  RV++L  NYL   IP + FD
Sbjct: 144 DAIPSALGN--LTKLETLNLYDNHISGHVPMELQNLYS-LRVMALDQNYLTGPIPKHLFD 200

Query: 441 KAFQANNNIMHVFLGQN 491
               A +++ H++LG N
Sbjct: 201 ----AKHSLTHIYLGDN 213


>07_03_0947 -
           22805419-22805571,22805736-22805966,22806161-22806328,
           22806425-22806540,22806853-22807005,22807241-22807384,
           22807584-22807707,22808126-22808689
          Length = 550

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 261 IDTIRSIVQNSHYKRLADLYLDNNSIAAVKEL-EGSEWFSTFRVLSLRGNYLKQ 419
           +D +R + ++ +   L D Y D+N++  V EL EG E F   R+++ RG+Y ++
Sbjct: 124 VDIMRHLPKHPNIVTLRDTYEDDNAVHLVMELCEGGELFD--RIVA-RGHYTER 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,557,256
Number of Sequences: 37544
Number of extensions: 246218
Number of successful extensions: 512
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)