Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C18
         (875 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    55   2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    45   0.002
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    37   0.77 
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 25/56 (44%), Positives = 30/56 (53%)
 Frame = +3

Query: 636 FPXGPPPLTXFXKIXPQFKGGKPXXXXKNTRVFPLETPPXPXXFQPCRXPENLSPF 803
           F  G  PLT   KI  Q +GG+     K+TR FPLE P     F+PCR P+   PF
Sbjct: 16  FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPF 71


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 23/76 (30%), Positives = 32/76 (42%)
 Frame = +3

Query: 546 PQNRGXXXXKTFXQXAXKXPKXLKXPXWWXFPXGPPPLTXFXKIXPQFKGGKPXXXXKNT 725
           P+N      +   + + + P+         FP   PPLT   KI PQFK  +     K T
Sbjct: 39  PRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYT 98

Query: 726 RVFPLETPPXPXXFQP 773
             FPL++P     F P
Sbjct: 99  TPFPLQSPSYSLLFPP 114


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 36.7 bits (81), Expect = 0.77
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +3

Query: 606 KXLKXPXWWXFPXGPPPLTXFXKIXPQFKGGKPXXXXKNTRVFPLETPPXPXXFQP 773
           + ++ P    F  G  PLT   K   Q  GG+     K+TR FPL  P     F P
Sbjct: 42  REVRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 18/50 (36%), Positives = 20/50 (40%)
 Frame = +3

Query: 636 FPXGPPPLTXFXKIXPQFKGGKPXXXXKNTRVFPLETPPXPXXFQPCRXP 785
           F  G  PLT   K   Q  GG+     K+ R FPL  P     F P   P
Sbjct: 84  FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,215,306
Number of Sequences: 1657284
Number of extensions: 4680907
Number of successful extensions: 10841
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10478
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)