Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C17
         (933 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   7.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   7.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   7.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   7.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 441 FIPIRTTCLSNL*LPVFHPNVDTCGLICLDILKDKWTALYD 563
           F PI   CL+ L L +F P+        + + + KW+ + D
Sbjct: 2   FKPILVLCLATLALGLFVPHFAADRNSIVHLFEWKWSDIAD 42


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 633 CCLKGFVYLVLLKDFGLTT--ILYVH 562
           CC+  F+YL   +   LTT  +LY +
Sbjct: 16  CCILFFIYLYWQQTSNLTTSKLLYTY 41


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 409 HKYKLSLEFPNSYPYAPPVCQIYD 480
           H   L  E   ++P +PP+ QI+D
Sbjct: 523 HVISLIDEISFTFPPSPPLSQIHD 546


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 422 YHLNFQIHTHTHHLFVKFMT 481
           +  ++Q  T T+ LF+ FMT
Sbjct: 164 FFASYQYGTKTYSLFIVFMT 183


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 422 YHLNFQIHTHTHHLFVKFMT 481
           +  ++Q  T T+ LF+ FMT
Sbjct: 164 FFASYQYGTKTYSLFIVFMT 183


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 525 NILSHTCQHLDEKQGVINLTN 463
           N L H C  LDEK   I LT+
Sbjct: 272 NRLCHLCFLLDEKLSYIILTS 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,899
Number of Sequences: 336
Number of extensions: 2976
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)