Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C17
(933 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 87 3e-18
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 64 2e-11
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 63 5e-11
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 60 3e-10
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 57 3e-09
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 54 3e-08
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 51 2e-07
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 47 4e-06
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 46 8e-06
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 41 2e-04
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 39 0.001
SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit 1|Schizosacchar... 29 0.94
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 29 0.94
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 29 1.2
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 28 1.6
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 28 1.6
SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2 |Schizosac... 27 2.9
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo... 27 2.9
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 27 5.0
SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr... 26 6.6
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 8.7
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 26 8.7
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 87.0 bits (206), Expect = 3e-18
Identities = 44/96 (45%), Positives = 55/96 (57%)
Frame = +3
Query: 351 NLFKWIGTINGPLXNCXXXXXXXXXXXXSKFIPIRTTCLSNL*LPVFHPNVDTCGLICLD 530
NL W GTI GP P + P++HPNVD G ICLD
Sbjct: 57 NLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFT-SPMWHPNVDMSGNICLD 115
Query: 531 ILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNSSS 638
ILKDKW+A+Y+V+T+LLS+QSLL EPN SPLN+ +
Sbjct: 116 ILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQA 151
Score = 43.2 bits (97), Expect = 5e-05
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +2
Query: 185 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFP 340
QN NPH S K S D H+V+KRL+ ELM LM + GISAFP
Sbjct: 6 QNQNPHTNS-----KNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFP 52
Score = 37.1 bits (82), Expect = 0.004
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPP 462
T Y G K+K+S+ FP +YPY+PP
Sbjct: 71 TYYEGLKFKISMSFPANYPYSPP 93
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 64.5 bits (150), Expect = 2e-11
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = +3
Query: 345 SENLFKWIGTINGPLXNCXXXXXXXXXXXXSKFIPIRTTCLSNL*LPVFHPNVDTCGLIC 524
S+N+ W I GP + P + + + +FHPNV G +C
Sbjct: 30 SDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFV-STMFHPNVYANGELC 88
Query: 525 LDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNSSS 638
LDIL+++W+ YDV +L SIQSLL +PN SP N+ +
Sbjct: 89 LDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEA 126
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 63.3 bits (147), Expect = 5e-11
Identities = 33/93 (35%), Positives = 48/93 (51%)
Frame = +3
Query: 348 ENLFKWIGTINGPLXNCXXXXXXXXXXXXSKFIPIRTTCLSNL*LPVFHPNVDTCGLICL 527
++LF W TI GP + P + + N ++HPN+++ G ICL
Sbjct: 28 DDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKV-NFTTRIYHPNINSNGSICL 86
Query: 528 DILKDKWTALYDVRTVLLSIQSLLAEPNTQSPL 626
DIL+D+W+ + VLLSI SLL +PN PL
Sbjct: 87 DILRDQWSPALTISKVLLSICSLLTDPNPDDPL 119
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 60.5 bits (140), Expect = 3e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 486 VFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNS 632
++HPNVD G ICL LK W+ +RTVLLSIQ+L+ PN PL++
Sbjct: 74 IYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDN 122
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPP 462
+ Y G K+ L L P+ YP PP
Sbjct: 44 SAYEGGKFHLELFLPDEYPMMPP 66
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/47 (48%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 486 VFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSP 623
++HPNV + G ICLDILKD+W+ +Y +++ L+S+QSLL P +P
Sbjct: 76 IYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNP 122
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPP 462
T Y G + + +E P YP+ PP
Sbjct: 46 TPYEGGYFVVDIEIPIDYPFRPP 68
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 54.0 bits (124), Expect = 3e-08
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +3
Query: 447 PIRTTCLSNL*LPVFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPL 626
P + CL+ ++HPN+D G +CL+IL+ W + ++ ++L+ +Q L PN + PL
Sbjct: 84 PPKVKCLNK----IYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPL 139
Query: 627 NSSS 638
N +
Sbjct: 140 NKEA 143
Score = 27.1 bits (57), Expect = 3.8
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 400 YAGHKYKLSLEFPNSYPYAPPVCQIYDSLF 489
Y G K+K ++ ++YP+ PP + + ++
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIY 94
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 483 PVFHPNVDTCGLICLDILKDK--WTALYDVRTVLLSIQSLLAEPNTQSPLNSSSF 641
P+FHPNV G +CL IL ++ W ++ +LL IQ LL +PN SP + ++
Sbjct: 80 PLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAY 134
Score = 34.7 bits (76), Expect = 0.019
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPPVCQIYDSLF 489
T + G YKL++ FP YP PP C+ LF
Sbjct: 51 TSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLF 82
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 46.8 bits (106), Expect = 4e-06
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 318 IKEYQHSLXSENLFKWIGTINGPLXNCXXXXXXXXXXXXSKFIPIRTTCLSNL*LPVFHP 497
I + + +L +NLF W T GP + P + + ++HP
Sbjct: 24 IPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFT-TRIYHP 82
Query: 498 NVDTCGLICLDILKDK-WTALYDVRTVLLSIQSLLAEPNTQSPLNSS 635
N D+ G +CL ILK + + +R+VL I LL EPN PL +S
Sbjct: 83 NFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVAS 129
Score = 35.5 bits (78), Expect = 0.011
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPPVCQIYDSLF 489
+VYAG K+ SL+FP YP+ PP + ++
Sbjct: 49 SVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIY 80
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 46.0 bits (104), Expect = 8e-06
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +3
Query: 351 NLFKWIGTINGPLXNCXXXXXXXXXXXXSKFIPIRTTCLSNL*LPVFHPNVD-TCGLICL 527
++F W I GP + PI + + HPN+ T G +C+
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVY-FQTKIVHPNISWTNGEVCM 91
Query: 528 DILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLN 629
DILK W+ + +++ L+I SLL+ + SPLN
Sbjct: 92 DILKTHWSPAWSLQSACLAIISLLSNYDASSPLN 125
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 41.1 bits (92), Expect = 2e-04
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 13/60 (21%)
Frame = +3
Query: 489 FHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLLSIQSLLAEPNTQSPLN 629
FHPNV G +C+ IL ++W+ + V +LLS+ S+LAEPN +S N
Sbjct: 79 FHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGAN 138
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPPVCQIYDSLFF 492
T + G Y +L+FP+ YP PP + ++ FF
Sbjct: 48 TPFEGGLYPATLKFPSDYPLGPPTLK-FECEFF 79
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 13/61 (21%)
Frame = +3
Query: 486 VFHPNVDTCGLICLDILK-------------DKWTALYDVRTVLLSIQSLLAEPNTQSPL 626
++HPNV G +C+ IL ++W ++ T+L+S+ S+L+ PN +SP
Sbjct: 78 IWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPA 137
Query: 627 N 629
N
Sbjct: 138 N 138
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPP 462
T+Y G + +L FP YP PP
Sbjct: 48 TLYEGGFFHATLSFPQDYPLMPP 70
>SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 232
Score = 29.1 bits (62), Expect = 0.94
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 323 LYHCTALAPLALSGVVCSQHDCLLV*SCLHSA 228
LY C A + ++G VC CL V C H A
Sbjct: 181 LYECNACREIVIAGYVCDCGYCLHVYCCKHLA 212
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 29.1 bits (62), Expect = 0.94
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +2
Query: 185 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRL------QKELMELMRCSDKGISAFPXK 346
QNI+ ++ + S K SED KL +N +V + Q + M+L S K ISA
Sbjct: 920 QNISTNHTNDSAALKSSEDHSKLANNFSVPDSIDHKFYQQVKNMQLELASLKQISAAFFT 979
Query: 347 RKPLQM 364
R PL++
Sbjct: 980 RIPLKI 985
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPPVCQIYDSLFFIQMLTRV 513
T Y G +Y +L FP YP+ PP ++ Q TR+
Sbjct: 47 TPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRL 86
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 637 ELLFKGLCVFGSAKRLWIDNNTVRTSYKAVHLSFKISK 524
EL+F+GL + + R+W + VR + H FKI +
Sbjct: 403 ELVFEGLYAYDTKNRIW-EQLAVRYEDRQKHCEFKIER 439
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 290 ELMELMRCSDKGISAFPXKRKPLQMDRDHQWTFXKLY 400
+L E++R S ++A P KPL+ R H +T K+Y
Sbjct: 78 QLKEIIRTSTSSMTAVP---KPLKFLRPHYFTLVKIY 111
>SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 522 ILSHTCQHLDEKQGVINLTNRWCV 451
ILS C H EK +++L N CV
Sbjct: 190 ILSTACNHFYEKDAILSLLNPTCV 213
>SPBC13A2.03 |||phosphatidate
cytidylyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 365 DRDHQWT-FXKLYTQATNTNYHLNFQIHTHTHHLFV--KFMTP 484
++D WT F Y T Y I+ + HHLF+ FM P
Sbjct: 102 EKDLPWTRFINWYFLMTTLYYAYGESIYAYFHHLFIMDSFMLP 144
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 394 TVYAGHKYKLSLEFPNSYPYAPPVCQIYDSLF 489
T Y+G +K+ +E P+ YP+ P + +F
Sbjct: 42 TPYSGGIWKVHVELPSEYPWKSPSIGFVNRIF 73
>SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 353 PLQMDRDHQWTFXKLYTQATNTNY 424
P+QMD+DH + F + A N +
Sbjct: 237 PIQMDKDHSYNFANVLGFANNEEF 260
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 206 ASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISA 334
+ + N + S K++HA K+LQKE + +D + A
Sbjct: 91 SEAENDEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSLKA 133
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 215 SNPAKQSEDTIK--LKDNHAVSKRLQKELME--LMRCSDKGISAFPXKRKPLQMDR 370
+ P + + IK +KD V + L+E + C DKGI F P +MD+
Sbjct: 43 NRPGSKYGNLIKEYIKDGKIVPMEITISLLETKMKECHDKGIDKFLIDGFPREMDQ 98
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,502,092
Number of Sequences: 5004
Number of extensions: 49242
Number of successful extensions: 159
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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