Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C16
         (862 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    33   1.0  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    33   1.0  
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        32   3.1  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        32   3.1  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       32   3.1  
BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6 prot...    30   9.4  
BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 prot...    30   9.4  
AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6 pro...    30   9.4  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -1

Query: 691 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 512
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630

Query: 511 RPFYGSWP 488
            P Y S P
Sbjct: 631 TPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -1

Query: 691 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 512
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631

Query: 511 RPFYGSWP 488
            P Y S P
Sbjct: 632 TPSYLSVP 639


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -2

Query: 693 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 565
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -2

Query: 693 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 565
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -2

Query: 693 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 565
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6
           protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 662 CRLPDTCPPFSLREAWRXLIAHAVGISVRCRSFXPSWAVCTNPPVQPDRCALSGN 826
           C L   C    + +AW+ L   A  +S +   + P+ A+  N PV PDR  +SG+
Sbjct: 158 CTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPDR-RISGH 208


>BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 protein
           protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 662 CRLPDTCPPFSLREAWRXLIAHAVGISVRCRSFXPSWAVCTNPPVQPDRCALSGN 826
           C L   C    + +AW+ L   A  +S +   + P+ A+  N PV PDR  +SG+
Sbjct: 158 CTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPDR-RISGH 208


>AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6
           protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 662 CRLPDTCPPFSLREAWRXLIAHAVGISVRCRSFXPSWAVCTNPPVQPDRCALSGN 826
           C L   C    + +AW+ L   A  +S +   + P+ A+  N PV PDR  +SG+
Sbjct: 158 CTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPDR-RISGH 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,665,515
Number of Sequences: 237096
Number of extensions: 2653222
Number of successful extensions: 7729
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7729
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)