BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C09
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0022 - 9015408-9015467,9015468-9015560,9017326-9017420,901... 38 0.015
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 32 0.55
08_02_1559 - 27873345-27873407,27873549-27873830,27874162-278742... 30 2.2
07_03_1408 - 26353389-26355191 30 2.2
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 30 2.9
10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175 29 3.9
09_04_0584 - 18714461-18716296 29 3.9
04_04_0861 + 28836544-28836609,28838191-28838264,28838551-288386... 29 3.9
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 29 3.9
01_05_0308 + 20710454-20710570,20710917-20710999,20711114-207112... 29 3.9
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 29 5.1
10_06_0082 - 10467972-10468486,10468530-10468670,10469211-10469538 29 5.1
10_04_0005 + 7390697-7390705,7390943-7391096,7391225-7391424,739... 29 5.1
03_02_0375 + 7880543-7880872,7881291-7881365,7881445-7881531,788... 29 5.1
01_06_0358 - 28677781-28677901,28678327-28678430,28678542-286786... 29 5.1
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 29 5.1
10_08_0492 + 18292208-18292248,18292874-18293365,18294139-182943... 29 6.7
09_04_0393 + 17255315-17256019,17256107-17257909 29 6.7
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 6.7
06_01_0804 + 6038640-6040262 29 6.7
04_01_0308 + 4188726-4190351 29 6.7
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 28 8.9
10_08_0897 - 21419639-21420633,21420826-21421153 28 8.9
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 28 8.9
08_02_0584 - 19010345-19010656,19010959-19011018 28 8.9
07_03_1311 + 25687434-25687884,25689313-25689566,25689632-256902... 28 8.9
06_03_1247 - 28676578-28676730,28677019-28677177,28677314-286774... 28 8.9
06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932... 28 8.9
02_05_0442 - 29044736-29046604 28 8.9
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 8.9
>11_03_0022 -
9015408-9015467,9015468-9015560,9017326-9017420,
9018019-9018079,9018601-9018620,9018743-9018824,
9018919-9019020,9019116-9019532
Length = 309
Score = 37.5 bits (83), Expect = 0.015
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +1
Query: 436 SEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKD-- 609
++I+ K+ + P ++ ++ + E+ P + + EK K +V+ +
Sbjct: 127 TKIMAKKLPDDPLGPILSAHKKLVAAKLAEDAEEHKPKGEGRREKRMAAEKGHVIPTNHL 186
Query: 610 --RXRLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEKILKKFDKRTFLDTL 780
+ + L KIAT+GVV+LFN+V Q + K ++ S K K+L K K+ FL L
Sbjct: 187 DSKEKELIKIATQGVVRLFNSVSKAQ-NCRKGLNP---SRSKDAKVLAKETKQAFLTEL 241
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 32.3 bits (70), Expect = 0.55
Identities = 27/124 (21%), Positives = 58/124 (46%)
Frame = +1
Query: 364 ISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEP 543
+ K +GSS + ++L + K +EIV+ E+E++ + +V E E +EE+ +E
Sbjct: 134 VKKEIGSSSSRRMRSLENALEKARAEIVEMEEEKRLMSRKLRKVAE-EKAAAREELKLE- 191
Query: 544 PAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSE 723
+H + + L K+ R ++ T+ + ++ S E E D+ ++
Sbjct: 192 -----RHHRRELEGANGKLVKEVARARQRVETERKARELMEEACEELSKEVEEDQAEVEA 246
Query: 724 GKKE 735
++E
Sbjct: 247 LRRE 250
>08_02_1559 -
27873345-27873407,27873549-27873830,27874162-27874263,
27874402-27874872
Length = 305
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +1
Query: 418 SRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNV 597
S+ ++ E+V+++ E + EV+ V E E + +EE EPP E+ + +
Sbjct: 84 SQEEEEEEVVEEQAEAEE--EVVASVEEEEEEAVEEEFAAEPP------EEAKVYVGNLP 135
Query: 598 LEKDRXRLLNKIATKGVVQLFNAVRNQQ 681
+ D L GVV++ + N++
Sbjct: 136 YDVDSEGLAQLFEQAGVVEVAEVIYNRE 163
>07_03_1408 - 26353389-26355191
Length = 600
Score = 30.3 bits (65), Expect = 2.2
Identities = 32/102 (31%), Positives = 43/102 (42%)
Frame = +1
Query: 445 VKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRXRLL 624
VKK K E+ + EV GE +E + K KK++ +VK EK I V + + +
Sbjct: 499 VKKIKVEESAEEVEGEKSEKKKKKKKDKGEQGSGDAEVKEEKADISDGEKVGSEKKKKKK 558
Query: 625 NKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEKILKK 750
VV +A EK SE KKEK KK
Sbjct: 559 KSKEGGDVVDPESAANGDGVEAEK-------SEKKKEKKKKK 593
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = +1
Query: 418 SRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNV 597
SR K+ E +K KE PS E E S E P AKK K EK ++
Sbjct: 26 SRKKEKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPA---PAAKKAKKEKTKEKVVVEE 82
Query: 598 LEKD 609
E+D
Sbjct: 83 EEED 86
>10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175
Length = 458
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/80 (23%), Positives = 41/80 (51%)
Frame = +1
Query: 388 KPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 567
K K +K+LV+ + +++ K E+P E I +++++ S+ ++ E+N + + + E
Sbjct: 146 KQKKEKSLVIETPRTQEIKIEQIKSEEPR-EEIQKLDKVLSEEEQWEVNEKLLLESYEEE 204
Query: 568 KPSIRIKPNVLEKDRXRLLN 627
I N+ E+D N
Sbjct: 205 NNLIEEIENIEEEDNAEQYN 224
>09_04_0584 - 18714461-18716296
Length = 611
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 433 HSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIR 582
H I+ E + FEV G N E+ V EEI E A+++ ++ +R
Sbjct: 3 HLAIIATELGDSSDFEVEGIQNLTENDVSDEEIEAEDLARRMWKDRIKLR 52
>04_04_0861 +
28836544-28836609,28838191-28838264,28838551-28838671,
28838832-28839143,28839241-28839345,28839447-28839901,
28840116-28840417,28840589-28840767,28841256-28841446,
28841595-28841728,28841875-28842113
Length = 725
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 598 LEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEKILKKFDKR 762
L + R LL + V QL A R + + K + D++ KILKKFDKR
Sbjct: 109 LGEQRAALLEQHDISQVFQLREAYREVGRDLIKLLRFVDMNATGIRKILKKFDKR 163
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/102 (21%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +1
Query: 499 EIESKVKKEEINVEPPA----KKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNA 666
E+E++ K++EI+++ + KK+ HEK + +K L R + +++
Sbjct: 215 ELENEAKEKEISLQRKSLNDMKKILHEKEEVLLKEQALLNQR--------DENILERLAY 266
Query: 667 VRNQQKSIEKEMDRNDLSEGKKEKILKKFDKRTFLDTLMGXE 792
V + +K +E+E +N L +K + +K+ ++ ++ E
Sbjct: 267 VTHSEKRVEEE--KNILEAERKVLLEEKYKLELKMEAIVSRE 306
>01_05_0308 +
20710454-20710570,20710917-20710999,20711114-20711264,
20711369-20711468,20711592-20711684,20711891-20711939,
20712024-20712121,20712300-20712406,20712498-20712671
Length = 323
Score = 29.5 bits (63), Expect = 3.9
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Frame = +1
Query: 451 KEKEEKPSFEVIGEVNEIESKVKKEEINVE-PPAKKV--------KHEKPSIRIKPNVLE 603
K KE++PSF + + S+ + + PP++ + E P R P
Sbjct: 189 KAKEKQPSFSKLRSIARAPSQRARSSSPAQRPPSENTIPTKRADKRSESPIPRTTPLTRS 248
Query: 604 KDRXRLLNKIATKGV-VQLFNAVRNQQKSIEKEMDRNDLSEGKK-EKILKKFDK 759
+ + + T V VQ+ + + S+ + DRND EG++ K KKF K
Sbjct: 249 GSLPQKPSLLKTSSVRVQMHTSEHKKLASVRSQADRNDDKEGEQTPKKGKKFLK 302
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 29.1 bits (62), Expect = 5.1
Identities = 25/117 (21%), Positives = 56/117 (47%)
Frame = +1
Query: 388 KPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 567
K K +K+LV+ + +++ K E+P E I +++++ S+ ++ E+N + + + E
Sbjct: 146 KQKKEKSLVIEIPRTQEIKIEQIKSEEPR-EEIQKLDKVLSEEEQWEVNEKLLLESYEEE 204
Query: 568 KPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEK 738
I N+ E+D N + + + N +++E DL GK+++
Sbjct: 205 NNLIEEIENIEEEDNAEQYNDFIDSLDEEGLHNLDNAMEAMEV-----DLGTGKRKR 256
>10_06_0082 - 10467972-10468486,10468530-10468670,10469211-10469538
Length = 327
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/136 (20%), Positives = 65/136 (47%)
Frame = +1
Query: 331 RLLANEGWADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIES 510
R +A+E + +S+ K + K +K+L + + +++ K E+P E I +++++ S
Sbjct: 145 RDIADE-YNNSMKKNYPGLRKKKEKSLAIETPRTQEIKIEQIKSEEPR-EEIQKLDKVLS 202
Query: 511 KVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSI 690
+ ++ E+N + + + E I N+ E+D N + + + N +++
Sbjct: 203 EEEQWEVNEKLLLESYEEENNLIEEIENIEEEDNAEQYNDFIDSLDEEGLHNLDNAMEAM 262
Query: 691 EKEMDRNDLSEGKKEK 738
E DL GK+++
Sbjct: 263 EV-----DLGTGKRKR 273
>10_04_0005 +
7390697-7390705,7390943-7391096,7391225-7391424,
7391649-7391739,7392042-7392385
Length = 265
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 394 KNKKTLVLSRAKKHSEIVKK-EKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEK 570
++K +V SRA S++ ++ +++ K E+I + + KKEE PP +K K E
Sbjct: 64 RSKTVVVKSRAADPSKVCERVQRKTKRRVELIFPLPPPPEEEKKEEAPAPPPEEK-KEEP 122
Query: 571 P 573
P
Sbjct: 123 P 123
>03_02_0375 +
7880543-7880872,7881291-7881365,7881445-7881531,
7881619-7881723,7881806-7881876,7882552-7882840
Length = 318
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +1
Query: 502 IESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQ 681
+++KVKKEE + + K +K S K + ++K + L +I TK + + +
Sbjct: 119 VKAKVKKEETDSDDERKPKAQKKSSAVTKTSKVKKIKDEDL-EIDTKKIKKGAATRKGDA 177
Query: 682 KSIEKEMDRNDLSEGKKEKILKKFDKRTFLDTL 780
+ ++KE DL K + ++ R F ++L
Sbjct: 178 EKVKKEKKVYDLPGQKHDPPQERDPLRIFYESL 210
>01_06_0358 -
28677781-28677901,28678327-28678430,28678542-28678625,
28679221-28679265,28679523-28679594,28679721-28679759,
28679966-28680061,28680492-28680566,28681717-28681764,
28681888-28681971,28682141-28682341,28682394-28682561,
28683232-28683372,28683470-28683517,28683845-28684087,
28684184-28684297,28685134-28685163,28685361-28685951,
28686033-28686620,28686744-28686863,28687764-28687938,
28688397-28688562,28688653-28688755,28689227-28689319,
28690759-28690918,28691754-28691872
Length = 1275
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 418 SRAKKHSEIVKKEKEEKPSFEV--IGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIK 588
S K++SEI+ E +P FEV + +V S V KE +N P +E S+ ++
Sbjct: 579 SLPKENSEILDDALELEPKFEVQALADVGFHSSGVDKEMVNPLSPEATSNNELDSVELE 637
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 29.1 bits (62), Expect = 5.1
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +1
Query: 355 ADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEIN 534
ADS++K P KK L V E E K ++ + IE + KE++
Sbjct: 567 ADSLNKARSLIHPPVKKPSKLGENLTSLAAVV-ENEHK---RLLARKSIIEKR--KEDLE 620
Query: 535 VEPPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKE-MDRN 711
+ K+ + EK + + E +R RLLN V+L R +++ +EKE ++
Sbjct: 621 RQILEKEKEEEKKRLSVLKKSAEDERIRLLND------VKLREQERIRRQLVEKEKIEAE 674
Query: 712 DLSEGKKEKILKKFDKRTFL 771
+L + + ++I K+ K+ L
Sbjct: 675 ELLQKQIKEIAKRGGKKPVL 694
>10_08_0492 +
18292208-18292248,18292874-18293365,18294139-18294319,
18294388-18294442,18294473-18294592,18295335-18295465,
18295691-18295891
Length = 406
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/79 (24%), Positives = 44/79 (55%)
Frame = +1
Query: 409 LVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIK 588
LVL+ + + E + +EE F EV+++ES+ ++EE E ++ + E+ ++ ++
Sbjct: 332 LVLTSSSEDEESEDESEEELGLF----EVDDVESEEEEEE-EEEEEEEEEEEEETNMWLR 386
Query: 589 PNVLEKDRXRLLNKIATKG 645
+ +K +LN++ +G
Sbjct: 387 RDTFDKFLDTMLNELQAEG 405
>09_04_0393 + 17255315-17256019,17256107-17257909
Length = 835
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 436 SEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRX 615
S + +E+ K +FE+ + E +K K + ++ KK++H K + N +EK R
Sbjct: 550 SALALQEELSKIAFEL--SMVEERTKAAKMPLELQQATKKLEHAKLNAVFARNEMEKARE 607
Query: 616 RLLNKIATKGVVQL 657
A VVQL
Sbjct: 608 EADQAQAEVNVVQL 621
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +1
Query: 388 KPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 567
KP K + + + K+ +E+K S E + +E ++++E + +P V +
Sbjct: 1174 KPSEKDDAGTKQTEDPVTLEKEPEEDKGSVEPTQDNAGLEKPLEEDEASAKPSEDSVVLD 1233
Query: 568 KPSI 579
KPS+
Sbjct: 1234 KPSV 1237
>06_01_0804 + 6038640-6040262
Length = 540
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/114 (19%), Positives = 54/114 (47%)
Frame = +1
Query: 361 SISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVE 540
++++ L +++ K ++ V +RAK H+E+ +EKE+ + ++ +K + E +
Sbjct: 300 ALAEALYAAEQKAREA-VETRAKVHTEMKMREKEKAEQ-----HLLQLATKARAEMLGAA 353
Query: 541 PPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKEM 702
PPA + + + R + RL + A + A R++ + + + +
Sbjct: 354 PPAPSERSKAAAERDAIREERRRERRLEARAAAAAASKKSAATRDRDRDVSERI 407
>04_01_0308 + 4188726-4190351
Length = 541
Score = 28.7 bits (61), Expect = 6.7
Identities = 29/138 (21%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Frame = +1
Query: 343 NEGWADSIS-KI-LGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKV 516
N+ AD+ S KI LG+ K + T +K + + E ++ E+ + + +E +
Sbjct: 289 NQFEADNKSLKIELGALKEAKEATAKAFDVEKAGILKELEDPKRKVEEIQAKKDLVEREN 348
Query: 517 KKEEINV---EPPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKS 687
K ++ V E K K + S++++ + L + + + ++ + + +K
Sbjct: 349 DKFQLEVLTGEQKQSKSKAKAKSLKVELSALVEAKEATAKAFDVEKA-KIMKELEDLKKK 407
Query: 688 IEKEMDRNDLSEGKKEKI 741
+E+ + DL EG+K+K+
Sbjct: 408 VEEIQGKKDLVEGEKDKL 425
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 28.3 bits (60), Expect = 8.9
Identities = 27/87 (31%), Positives = 39/87 (44%)
Frame = +1
Query: 490 EVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAV 669
E+ E+K+K EIN E +K E P IR K ++ R+ K K
Sbjct: 267 EIKYYENKLK--EIN-EEYNNSMKCEWPKIRDKELYFYRELARV--KKVKKNEDMAVEIF 321
Query: 670 RNQQKSIEKEMDRNDLSEGKKEKILKK 750
+NQQ IE+ + GK+E+ L K
Sbjct: 322 KNQQTKIEQIKRKEQDKHGKEEQNLGK 348
>10_08_0897 - 21419639-21420633,21420826-21421153
Length = 440
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/117 (20%), Positives = 55/117 (47%)
Frame = +1
Query: 388 KPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 567
K K +K+L + + +++ K E+P E I +++++ S+ ++ E+N + + + E
Sbjct: 294 KQKKEKSLAIETPRTQEIKIEQIKSEEPR-EEIQKLDKVLSEEEQWEVNEKLLLESYEEE 352
Query: 568 KPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEK 738
I N+ E+D N + + + N +++E DL GK+++
Sbjct: 353 NNLIEEIENIEEEDNAEQYNDFIDSLDEEGLHNLDNAMEAMEV-----DLGTGKRKR 404
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 535 VEPPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKEMDRND 714
+EPP K +HE P R+ + ++K R + + +V+ R + ++ D +D
Sbjct: 204 LEPPRKSTRHELPP-RLSNDRVDKRRRSTGRREKPRSIVEKKEKSRRSVDTFDRTRDEHD 262
Query: 715 LSEGKKEKI 741
+ ++ I
Sbjct: 263 QPDKPRKSI 271
>08_02_0584 - 19010345-19010656,19010959-19011018
Length = 123
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 427 KKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 567
K+H++ K EKE+K E GE +K KKE+ + K+ K +
Sbjct: 20 KEHAKEAKPEKEKKEKKEKNGEEAAKPAKEKKEKKEKKEKGKEKKEK 66
>07_03_1311 +
25687434-25687884,25689313-25689566,25689632-25690252,
25690684-25690836
Length = 492
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 548 AGGSTLISSFLTFDSISFTSPITSKLGFSSFSFFTISECFL 426
AGG +S + ++ F +T ++G ++ FFT S C L
Sbjct: 92 AGGVPPVSFVVADGAMGFAVHVTKEMGIPTYLFFTHSACGL 132
>06_03_1247 -
28676578-28676730,28677019-28677177,28677314-28677412,
28677504-28677554,28677712-28678983,28680209-28680412,
28682330-28682439,28684962-28685067
Length = 717
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +1
Query: 343 NEGWADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKK 522
N WADS K +P + V+K EEK +GE + ES ++
Sbjct: 179 NARWADSKEKPRYLREPFRSSGTKAACPSSSKAPVRKYFEEKQGRTFLGEADNAESSSRR 238
Query: 523 EEINVEPPAKKVKHEK 570
E N +KK E+
Sbjct: 239 TEANRLQCSKKAVVEE 254
>06_03_1085 +
27491735-27492754,27492854-27492978,27493088-27493232,
27493328-27493591
Length = 517
Score = 28.3 bits (60), Expect = 8.9
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 370 KILGSSKPKNKKTLVLSRAKKHSEIV---KKEKEEKPSFE--VIGEVNEIESKVKKEEIN 534
K+ K + KK + +K E KK+ EEK E V E E E ++EE
Sbjct: 80 KLFDDGKVEAKKKAAAAEEEKAVEEAAGEKKDGEEKKEEEEPVTEEKKEEEQGEEEEEPK 139
Query: 535 VEPPAKKVKHEKPSIRIKPNVLEKD 609
E + K EKP+ V++KD
Sbjct: 140 KEEADEGEKEEKPAEEEAAAVVDKD 164
>02_05_0442 - 29044736-29046604
Length = 622
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 463 EKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRXRLLNKIATK 642
E P F ++ VN E +E + V P ++H + + + +EK R L + T+
Sbjct: 422 EVPGFNIMHSVNAWEEAGGEELVLVAPNVLSIEHALEHMELVHSCVEKVRINLRTGVVTR 481
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +1
Query: 412 VLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKH 564
+LS K+H E+ + E + ++ EVN+IE + ++ + K +++
Sbjct: 4161 ILSEDKEHMEVEHVQSHENETGFIVKEVNKIEFEEADSDVRSDVDQKAIQN 4211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,465,049
Number of Sequences: 37544
Number of extensions: 244597
Number of successful extensions: 847
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -