Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C09
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    29   0.26 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   9.7  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
 Frame = +1

Query: 424  AKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPS----IRIKP 591
            A+ HS+  K    E    E     +   +K    + NV+   +++     S    ++ K 
Sbjct: 843  ARTHSDPEKVRALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKI 902

Query: 592  NVLEKDRXRLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEKILKKFDKRTFL 771
            N L K   +L   I+ K  V++  + RN QKS +K     D  E  +  I K  D+RT L
Sbjct: 903  NGLGKQIDKLSANIS-KLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQL 961

Query: 772  D 774
            +
Sbjct: 962  E 962


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 165 YHFNISNFYLTPNSSQQFLIY 103
           Y   +SN  +T NSS  F IY
Sbjct: 343 YMVKVSNLLVTINSSVNFFIY 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,217
Number of Sequences: 2352
Number of extensions: 10401
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)