Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C09
(909 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 24 1.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 2.2
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 23 2.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 5.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.7
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 8.9
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 24.2 bits (50), Expect = 1.7
Identities = 19/91 (20%), Positives = 36/91 (39%)
Frame = +1
Query: 451 KEKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRXRLLNK 630
+E K + IGE V+ E P +K+K + K NV++K ++
Sbjct: 33 REMTSKYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNCVLEKFNVMDKKNGKIRYN 92
Query: 631 IATKGVVQLFNAVRNQQKSIEKEMDRNDLSE 723
+ K + + F + + +D +D E
Sbjct: 93 LLKKVIPEAFKEIGVEMIDSCSNVDSSDKCE 123
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -2
Query: 512 FDSISFTSPITSKLGFSSFSFFTISECFLALDKTNVFLFLGLLEPKI 372
F SIS T + ++GF ++ S + + + +L + P+I
Sbjct: 218 FSSISITFKLAREMGFFMMDYYIPSILIVVISWVSFWLHMDASPPRI 264
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 573 INKN*AKRLRKGQRXIIE*NSH*RCSTIIQCSKK 674
I++N K+L I E N H + S ++QC K
Sbjct: 92 IDENSVKQLVSDCSTISEENPHLKASKLVQCVSK 125
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 385 WNLKFLRLNPPTLRLLKGDSLPLNL 311
W L NPP + L DSL L++
Sbjct: 303 WQLPHNSTNPPNILLYYRDSLALSV 327
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 302 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 357
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 358 AANPPSGYIR 367
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 302 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 357
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 358 AANPPSGYIR 367
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 302 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 357
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 358 AANPPSGYIR 367
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 302 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 357
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 358 AANPPSGYIR 367
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 302 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 357
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 358 AANPPSGYIR 367
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 302 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 357
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 358 AANPPSGYIR 367
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 370 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 425
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 426 AANPPSGYIR 435
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.7
Identities = 13/70 (18%), Positives = 30/70 (42%)
Frame = +1
Query: 352 WADSISKILGSSKPKNKKTLVLSRAKKHSEIVKKEKEEKPSFEVIGEVNEIESKVKKEEI 531
W + ++ K KKT++ + E +EK S ++ V +I+ ++ +
Sbjct: 370 WLPCLLRMSRPGKKITKKTILGGNRRAKG----MELQEKSSKSLLANVLDIDDDIRHKNS 425
Query: 532 NVEPPAKKVK 561
PP+ ++
Sbjct: 426 AANPPSGYIR 435
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like
GPCR protein.
Length = 381
Score = 21.8 bits (44), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 87 NFSLKNLV*VMYLTKILRIPY 25
N+ LKNL YL K+L Y
Sbjct: 14 NWDLKNLTEAEYLAKVLGPKY 34
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,453
Number of Sequences: 438
Number of extensions: 3488
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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