Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C06
         (955 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical pr...    36   0.056
AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical ...    33   0.30 
U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical pr...    30   2.8  
AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical ...    29   3.7  

>Z79602-1|CAB01888.3|  508|Caenorhabditis elegans Hypothetical
           protein K09E9.1 protein.
          Length = 508

 Score = 35.5 bits (78), Expect = 0.056
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 436 PMIFVCSRVVSIGHFLLLYFVFLRLSSVNTLVAGLHVLCGG 314
           P+   C  +++IGH LL + ++L   ++N  +A +   CGG
Sbjct: 144 PVYLGCLLMITIGHILLTFSMYLSWMTINATLAAMGFFCGG 184


>AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical
           protein F52G3.4 protein.
          Length = 1009

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 493 ENLDIGPMTTICRYCNALKFKRETAGLCCASGKV 594
           E LDIG  T  C +C AL F+      CC +G V
Sbjct: 176 EVLDIGQRTVPCPFCGALHFEDARNFTCCKNGAV 209


>U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical
           protein F33G12.5 protein.
          Length = 928

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 331 ASQQQVYSQNLSEERQNIIRENARLRQRVST 423
           ASQ+   SQ   EE Q I++ N  L++ +ST
Sbjct: 541 ASQESAASQEQREESQEIVKLNEELKENIST 571


>AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical
           protein Y32H12A.7 protein.
          Length = 600

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 657 RFQPFSSTHPXNTITAFA*LLWRYII 734
           RF P   T+P   I AF  L WRY++
Sbjct: 100 RFSPILLTYPLTKIEAFENLWWRYLL 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,853,081
Number of Sequences: 27780
Number of extensions: 373122
Number of successful extensions: 1044
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)