Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C05
(939 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 62 1e-08
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 62 2e-08
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 57 7e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 42 0.023
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.069
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 39 0.21
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.37
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 36 1.5
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.0
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -2
Query: 551 PFAGLLLTCXFLRYPLILWITVLPPLSELIPLAAAERP 438
P LLTC F YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +1
Query: 604 PWTSITKIDAQVRGGETRQDYKDTRRFPL 690
P TSITKIDAQVRGGETRQDYKDTRRFPL
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRFPL 50
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 59.7 bits (138), Expect = 1e-07
Identities = 39/74 (52%), Positives = 43/74 (58%)
Frame = +3
Query: 387 VCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQEXTCEQKASKRPXTVK 566
+C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEEI--- 77
Query: 567 RPRCWRFSIGSAPL 608
RPR RFSIGSAPL
Sbjct: 78 RPRRSRFSIGSAPL 91
Score = 52.4 bits (120), Expect = 2e-05
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +1
Query: 604 PWTSITKIDAQVRGGETRQDYKDTRRFPL 690
P TSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 56.8 bits (131), Expect = 7e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1
Query: 604 PWTSITKIDAQVRGGETRQDYKDTRRFPL 690
P TSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 351 CINESANARGXAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 518
CI + A AR AV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 41.9 bits (94), Expect = 0.023
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 470 HSKAVIRLSTESGDNAGXNM 529
HSKAVIRLSTESGDNAG NM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 40.3 bits (90), Expect = 0.069
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 154 DPDMIXYIDEFGQTTTXMQ 210
DPDMI YIDEFGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 38.7 bits (86), Expect = 0.21
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -3
Query: 808 TRTRXYEKAPRFPXGRKADQVFXVSGXGSGTXESARGSXPGGNAWYLYSPVG 653
T + YEKAPRFP G+KA+Q VSG G A G + SPVG
Sbjct: 45 TSSVSYEKAPRFPKGKKAEQ---VSGKRQGRNRRAHEGAAGEKSPASLSPVG 93
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 38.3 bits (85), Expect = 0.28
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 574 VAGVFP*APPPWTSITKIDAQVRGGETRQDYKDTRRFPLXS 696
++ +FP PP T+ITKI Q + +T+ +YK T FPL S
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQS 105
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.37
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3
Query: 421 ERGSGRAPNTQTAXPRALADSLMQ 350
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.9 bits (79), Expect = 1.5
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 349 SALMNRPTXGXRRFAYW 399
+ALMNRPT G RRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 560 GXWPFAGLLLTCXFLRYP---LILWITVLPPLSELIPLAAAERP 438
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,294,802
Number of Sequences: 1657284
Number of extensions: 11729283
Number of successful extensions: 27633
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 26756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27626
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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