Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C04
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 277 6e-75
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 236 2e-62
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 61 9e-10
U80444-3|AAB37789.1| 326|Caenorhabditis elegans Serpentine rece... 29 3.2
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 29 5.6
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 28 9.7
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 28 9.7
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 277 bits (680), Expect = 6e-75
Identities = 126/184 (68%), Positives = 149/184 (80%)
Frame = +1
Query: 298 TKAMISKPAPEWEATAVVNGEFTQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIE 477
+KA I KPAP+++ AVV+GEF +SLS +KGKY+V FFYPLDFTFVCPTEI+AFS+R E
Sbjct: 2 SKAFIGKPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAE 61
Query: 478 EFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLTHSIAKDYGVYLEDLG 657
EF+ INT V+A S DS F+HLAWIN PRK GGLG++NIP+L+D H I++DYGV ED G
Sbjct: 62 EFKAINTVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEG 121
Query: 658 HTLRGLFIIDDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDNHGEVCPAGWKPGQDTI 837
RGLFIID LRQIT+NDLPVGRSVDETLRLVQAFQ+ + HGEVCPAGW PG DTI
Sbjct: 122 IAFRGLFIIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTI 181
Query: 838 IPNL 849
P +
Sbjct: 182 KPGV 185
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 236 bits (577), Expect = 2e-62
Identities = 104/175 (59%), Positives = 133/175 (76%)
Frame = +1
Query: 325 PEWEATAVVNGEFTQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIEEFRKINTEV 504
P ++ TAVV+G+F +S +KGK+LV FFYPLDFTFVCPTEI+A+ +R EFR + EV
Sbjct: 40 PAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEV 99
Query: 505 VACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLTHSIAKDYGVYLEDLGHTLRGLFII 684
VACS DSHF+HLAW+NTPRK+GGLG ++IPLL+D IA +GV ++ G + RGLF+I
Sbjct: 100 VACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGLSYRGLFLI 159
Query: 685 DDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDNHGEVCPAGWKPGQDTIIPNL 849
D G +R T NDLPVGRSVDETLR+++AFQ++D HGEVCPA W TI P +
Sbjct: 160 DPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIKPGV 214
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 61.3 bits (142), Expect = 9e-10
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Frame = +1
Query: 394 KYLVFFFYPLDFTFVCPTEILAFSERIEEFRKINTEVVACSVDSHFTHLAW---INTPRK 564
++L+ F +P DFT VC TE+ + EFRK + +++A S+DS TH W IN+ +
Sbjct: 29 QWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHRDWAKDINSVAQ 88
Query: 565 EGGLGK-INIPLLSDLTHSIAKDYGVY------LEDLGHTLRGLFIIDDKGILRQITMND 723
G + +++D SI + G+ E + + R + + L+ +
Sbjct: 89 LSNCGSHLPFEIIADTDRSICTELGMIDPDEMNSEGICLSARAVMLFGPDKKLKSKILYP 148
Query: 724 LPVGRSVDETLRLVQAFQYTDNHGEVCPAGWKPGQDTI 837
GR+ E LR+V Q PA W G + I
Sbjct: 149 ATFGRNFVEILRMVDGVQLGTKAPVATPANWIAGDNVI 186
>U80444-3|AAB37789.1| 326|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 14 protein.
Length = 326
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 361 FTQLSLSSFKGKYLVFFFYPLDFTFVCPT-EILAFSERIEEFRK-INTEVVACSVDSHF 531
F ++S +S LVF L FTF+C +L ER +E K I+ V S+ F
Sbjct: 193 FKKVSWASQSRFQLVFIIIALSFTFICTAITLLKLPERSKEIEKAISNATVIISIGFTF 251
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 272 RAPPGKTLPLP-NE*HESPSKSEDEQVITLK 183
++PPGKT LP + H S S SED++ TLK
Sbjct: 264 QSPPGKTASLPTHSPHPSESNSEDDEP-TLK 293
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 448 EILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLT 612
E+L +ER+E R TEV H A I+ + I + L SDL+
Sbjct: 3 ELLCRTERVEHARNFKTEVRGLMDVDHLIERACIHRNMNHSHIHTILLSLFSDLS 57
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 448 EILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLT 612
E+L +ER+E R TEV H A I+ + I + L SDL+
Sbjct: 3 ELLCRTERVEHARNFKTEVRGLMDVDHLIERACIHRNMNHSHIHTILLSLFSDLS 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,152,715
Number of Sequences: 27780
Number of extensions: 408587
Number of successful extensions: 958
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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