Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_C03
(919 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 161 3e-38
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 113 6e-24
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 93 1e-17
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 91 5e-17
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 72 2e-11
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 70 7e-11
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 67 5e-10
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 66 9e-10
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 62 1e-08
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 58 4e-07
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 53 9e-06
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 46 0.001
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 39 0.21
UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa... 35 2.5
UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropy... 34 5.9
UniRef50_UPI0000E4A210 Cluster: PREDICTED: similar to Spt6, part... 33 7.7
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 33 7.7
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 161 bits (390), Expect = 3e-38
Identities = 81/116 (69%), Positives = 86/116 (74%)
Frame = +2
Query: 110 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKE 289
MPPKKDAK+SAKQPQ LNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 290 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 457
VP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQHH QVIYTRATKGD+
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDE 116
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 113 bits (272), Expect = 6e-24
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +2
Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 416 HGQVIYTRATKGDDPVA 466
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 92.7 bits (220), Expect = 1e-17
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +2
Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L +GLI+ V H
Sbjct: 163 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSVH 222
Query: 416 HGQVIYTRAT 445
Q IYTRAT
Sbjct: 223 SSQQIYTRAT 232
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 90.6 bits (215), Expect = 5e-17
Identities = 40/69 (57%), Positives = 55/69 (79%)
Frame = +2
Query: 239 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHH 418
NN V+ DK Y+++ KEVP YKLI+ +V+ +R+K+ GSLARRA+ L ++GLIK+VV HH
Sbjct: 37 NNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIKRVVHHH 96
Query: 419 GQVIYTRAT 445
Q+IYTRAT
Sbjct: 97 AQLIYTRAT 105
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +2
Query: 239 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVV-QH 415
N+ V FDK TY+KL ++P+ +LIT + + ++LKV S+AR+AL L E+ LIK V QH
Sbjct: 36 NHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKLIKPVCDQH 95
Query: 416 HGQVIYTRA 442
H Q +YT+A
Sbjct: 96 HAQRLYTKA 104
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 70.1 bits (164), Expect = 7e-11
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = +2
Query: 248 VLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQV 427
V+ D+ Y+++ KEVP Y+ ++ +V+ +RLK+ GSLAR AL L ++G+IK + +H Q
Sbjct: 40 VILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQA 99
Query: 428 IYTRATKGD 454
IYTRAT +
Sbjct: 100 IYTRATASE 108
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 67.3 bits (157), Expect = 5e-10
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +2
Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
L N V+FDK TY+KL EVP+YKLITP+++S+RLK+ S+A L +L + LI+ V
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLVSCS 95
Query: 416 HGQVIYTR 439
+YTR
Sbjct: 96 SKTRVYTR 103
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 66.5 bits (155), Expect = 9e-10
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +2
Query: 239 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV-VQH 415
N+ VLFDK T ++ + +V + +L+TPAVV +LKV S AR L + KG+IK V Q
Sbjct: 38 NHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKGIIKPVGEQT 97
Query: 416 HGQVIYTRA 442
HGQ+IYT+A
Sbjct: 98 HGQMIYTKA 106
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +2
Query: 266 TYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYT 436
TY+KL EVP+YK+IT AV+ +RL++ SLAR+ + L+ KGLIK +V H +YT
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIKPLVSHAALNVYT 76
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 57.6 bits (133), Expect = 4e-07
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +2
Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV-VQ 412
LNN V+FDK T +K K+VP K+ITP VV++R+ + G+L + L L +K LI V V
Sbjct: 39 LNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELIVPVKVD 98
Query: 413 HHGQVIYTRATK 448
+H +V ++R+ K
Sbjct: 99 YHIRV-FSRSDK 109
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 53.2 bits (122), Expect = 9e-06
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 332 RLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDD 457
RL++RGSLAR AL EL KGLIK V +H +VIYTR TK D
Sbjct: 53 RLEIRGSLARAALQELLGKGLIKLVSKHRARVIYTRNTKSGD 94
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 LNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKVRGSLARRALIELREKGLIKQV-V 409
LNN V D +Y+++ ++P+ LIT + VS++ KV GSLARR + + GL+
Sbjct: 103 LNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSGLLVPAGD 162
Query: 410 QHHGQVIYT 436
Q+ Q I+T
Sbjct: 163 QNSKQYIFT 171
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 38.7 bits (86), Expect = 0.21
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +2
Query: 245 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQ 424
QVL D+ ++ + KEV ++ITP ++ + ++ S+A + L L+E+G + V + H
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRT 101
Query: 425 VIYTRATK 448
IY A +
Sbjct: 102 EIYVPAKR 109
>UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0489400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 95
Score = 35.1 bits (77), Expect = 2.5
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -3
Query: 230 HELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWAASLN 102
H LF W++S S+ RHR LP +AVW RPS +++L+
Sbjct: 47 HPLFRWSSSLSFARRHRFLPLVHSLRQAVW-SLLRPSLSSTLS 88
>UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S25e - Aeropyrum
pernix
Length = 103
Score = 33.9 bits (74), Expect = 5.9
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +2
Query: 272 EKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIY 433
E+ KEV + + +TP +++++ V+ S+ARR L L E+G++ ++ +Y
Sbjct: 36 EQARKEVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVLVLFTRNRRSPLY 89
>UniRef50_UPI0000E4A210 Cluster: PREDICTED: similar to Spt6,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Spt6, partial - Strongylocentrotus
purpuratus
Length = 913
Score = 33.5 bits (73), Expect = 7.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 106 KDAAQEGREGFGQTASKNTEEEGRIRWRQSQEE 204
KD +E EG G+T K+TEE+G + + EE
Sbjct: 149 KDGEEEDGEGEGETKKKDTEEDGEVADEEEMEE 181
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 33.5 bits (73), Expect = 7.7
Identities = 13/44 (29%), Positives = 30/44 (68%)
Frame = +2
Query: 269 YEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIK 400
Y+++ +EV + +TP +++E+ + SLAR+ L L ++G+++
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKEGIVE 61
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,485,697
Number of Sequences: 1657284
Number of extensions: 10155682
Number of successful extensions: 31362
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 30049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31302
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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