Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C03
         (919 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     113   8e-25
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
BC115387-1|AAI15388.1| 1157|Homo sapiens DUSP27 protein protein.       32   3.4  
AL158837-4|CAH69958.1| 1158|Homo sapiens novel protein protein.        32   3.4  
AF119045-1|AAK02011.1|  661|Homo sapiens unknown protein.              32   3.4  

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 416 HGQVIYTRATKGDDPVA 466
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 416 HGQVIYTRATKGDDPVA 466
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 416 HGQVIYTRATKGDDPVA 466
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 416 HGQVIYTRATKGDDPVA 466
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 236 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 415
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 416 HGQVIYTRATKGDDPVA 466
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC115387-1|AAI15388.1| 1157|Homo sapiens DUSP27 protein protein.
          Length = 1157

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -3

Query: 182  RILPSSSVFFEAVWPKPSRPSWAASLNWKETIDNKQVAFVTFAQDXKILRN 30
            R  P SS   E+  P+P RP+WA S +W++  ++ +  F  F    K  ++
Sbjct: 1043 RRTPESSEREES--PEPQRPNWARSRDWEDVEESSKSDFSEFGAKRKFTQS 1091


>AL158837-4|CAH69958.1| 1158|Homo sapiens novel protein protein.
          Length = 1158

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -3

Query: 182  RILPSSSVFFEAVWPKPSRPSWAASLNWKETIDNKQVAFVTFAQDXKILRN 30
            R  P SS   E+  P+P RP+WA S +W++  ++ +  F  F    K  ++
Sbjct: 1043 RRTPESSEREES--PEPQRPNWARSRDWEDVEESSKSDFSEFGAKRKFTQS 1091


>AF119045-1|AAK02011.1|  661|Homo sapiens unknown protein.
          Length = 661

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -3

Query: 182 RILPSSSVFFEAVWPKPSRPSWAASLNWKETIDNKQVAFVTFAQDXKILRN 30
           R  P SS   E+  P+P RP+WA S +W++  ++ +  F  F    K  ++
Sbjct: 546 RRTPESSEREES--PEPQRPNWARSRDWEDVEESSKSDFSEFGAKRKFTQS 594


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,668,083
Number of Sequences: 237096
Number of extensions: 1794936
Number of successful extensions: 3783
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3782
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)