Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_C02
         (840 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian...    38   0.31 
UniRef50_A0CZ14 Cluster: Chromosome undetermined scaffold_31, wh...    38   0.41 
UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Re...    35   2.9  
UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, wh...    35   2.9  

>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
            thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1289

 Score = 37.9 bits (84), Expect = 0.31
 Identities = 20/75 (26%), Positives = 22/75 (29%)
 Frame = +3

Query: 501  PXXPPXXXXPXXXKXXXXKXXXPPXXXPXKKXGXPPPXKXXXXXXXPPPXXKXXXGXXXF 680
            P  PP             +   PP   P  + G PPP         PPP      G    
Sbjct: 1064 PPPPPMFGGAQPPPPPPMRGGAPPPPPPPMRGGAPPPPPPPMRGGAPPPPPPPMHGGAPP 1123

Query: 681  XXXPXXXGGXXXPPP 725
               P   GG   PPP
Sbjct: 1124 PPPPPMRGGAPPPPP 1138



 Score = 34.7 bits (76), Expect = 2.9
 Identities = 19/75 (25%), Positives = 21/75 (28%)
 Frame = +3

Query: 501  PXXPPXXXXPXXXKXXXXKXXXPPXXXPXKKXGXPPPXKXXXXXXXPPPXXKXXXGXXXF 680
            P  PP             +   PP   P  + G PPP         PPP      G    
Sbjct: 1076 PPPPPMRGGAPPPPPPPMRGGAPPPPPPPMRGGAPPPPPPPMHGGAPPPPPPPMRGGAPP 1135

Query: 681  XXXPXXXGGXXXPPP 725
               P    G   PPP
Sbjct: 1136 PPPPPGGRGPGAPPP 1150


>UniRef50_A0CZ14 Cluster: Chromosome undetermined scaffold_31, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_31,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 417

 Score = 37.5 bits (83), Expect = 0.41
 Identities = 23/100 (23%), Positives = 25/100 (25%)
 Frame = +3

Query: 501 PXXPPXXXXPXXXKXXXXKXXXPPXXXPXKKXGXPPPXKXXXXXXXPPPXXKXXXGXXXF 680
           P  PP    P            PP   P ++   PPP         PPP      G    
Sbjct: 312 PPPPPPPPLPNSQAPPPPPPPPPPPPIPGQQNPPPPPPPPLPGQQAPPPPPPLPGGARPP 371

Query: 681 XXXPXXXGGXXXPPPXXXXXXXXXXXXXXXXPXXXXXPPP 800
              P   G    PPP                P     PPP
Sbjct: 372 PPPPPPFGNAPPPPPPPPGSKIPGPPPPPGGPRPPGPPPP 411


>UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Rep:
           Os07g0596300 protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 754

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 4/86 (4%)
 Frame = +3

Query: 480 PXXKXGXPXXPPXXXX----PXXXKXXXXKXXXPPXXXPXKKXGXPPPXKXXXXXXXPPP 647
           P  + G P  PP        P            PP   P  + G PPP          PP
Sbjct: 199 PGARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPPPPGAGGRAPP 258

Query: 648 XXKXXXGXXXFXXXPXXXGGXXXPPP 725
                 G       P   GG   PPP
Sbjct: 259 PPPAPGGRLGGPPPPPPPGGRAPPPP 284



 Score = 34.3 bits (75), Expect = 3.9
 Identities = 19/75 (25%), Positives = 20/75 (26%)
 Frame = +3

Query: 501 PXXPPXXXXPXXXKXXXXKXXXPPXXXPXKKXGXPPPXKXXXXXXXPPPXXKXXXGXXXF 680
           P  PP                 PP   P  + G PPP         PPP      G    
Sbjct: 159 PPPPPITRSGAPPSPPPPPSPPPPPPPPGARPGPPPPPPPPGARPGPPPPPPPPGGRPSA 218

Query: 681 XXXPXXXGGXXXPPP 725
              P   G    PPP
Sbjct: 219 PPLPPPGGRASAPPP 233


>UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_26,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 417

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 16/49 (32%), Positives = 17/49 (34%)
 Frame = +3

Query: 501 PXXPPXXXXPXXXKXXXXKXXXPPXXXPXKKXGXPPPXKXXXXXXXPPP 647
           P  PP    P   K    +   PP   P  K G PPP         PPP
Sbjct: 249 PTAPPPPPPPPPSKQQQQQQVVPPPPAPSAKGGAPPPPPPPPPPPPPPP 297


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,133,364
Number of Sequences: 1657284
Number of extensions: 5577697
Number of successful extensions: 11037
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7179
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)