Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B24
         (940 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.         67   3e-11
AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p pro...    67   3e-11
AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-P...    67   3e-11
AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-P...    67   3e-11
AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-P...    67   3e-11
AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p pro...    29   9.2  
AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-P...    29   9.2  

>U40226-1|AAB01760.1|   76|Drosophila melanogaster L43 protein.
          Length = 76

 Score = 67.3 bits (157), Expect = 3e-11
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +2

Query: 98  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33


>AY075553-1|AAL68360.1|   56|Drosophila melanogaster RH58777p
           protein.
          Length = 56

 Score = 67.3 bits (157), Expect = 3e-11
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +2

Query: 98  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33


>AE013599-3176|AAF46708.1|   76|Drosophila melanogaster CG10071-PC,
           isoform C protein.
          Length = 76

 Score = 67.3 bits (157), Expect = 3e-11
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +2

Query: 98  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33


>AE013599-3175|AAM70864.1|   76|Drosophila melanogaster CG10071-PB,
           isoform B protein.
          Length = 76

 Score = 67.3 bits (157), Expect = 3e-11
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +2

Query: 98  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33


>AE013599-3174|AAM70863.1|   76|Drosophila melanogaster CG10071-PA,
           isoform A protein.
          Length = 76

 Score = 67.3 bits (157), Expect = 3e-11
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +2

Query: 98  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 196
           MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33


>AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p protein.
          Length = 1556

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +2

Query: 98   MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFNGIKGFARRVT*SQPSN 268
            +A+  NH NHNQ ++ H+  +K       E      S   +G +  +   + SQ S+
Sbjct: 1084 VAEPANHHNHNQGQQNHQGHLKPAAVPGKEQLSAKSSHCSSGYQSISTNPSPSQSSS 1140


>AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-PA
            protein.
          Length = 1556

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +2

Query: 98   MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFNGIKGFARRVT*SQPSN 268
            +A+  NH NHNQ ++ H+  +K       E      S   +G +  +   + SQ S+
Sbjct: 1084 VAEPANHHNHNQGQQNHQGHLKPAAVPGKEQLSAKSSHCSSGYQSISTNPSPSQSSS 1140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,066,016
Number of Sequences: 53049
Number of extensions: 251750
Number of successful extensions: 973
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4648779081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)