Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B23
(879 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 24 1.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 24 1.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 1.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 1.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 1.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 1.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 1.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 1.8
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 22 5.5
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 9.7
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 9.7
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFF 52
AH K+K + KK WS+ + +F
Sbjct: 109 AHLKDKKKIRAKKRWSQCMYMYF 131
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFF 52
AH K+K + KK WS+ + +F
Sbjct: 423 AHLKDKKKIRAKKRWSQCMYMYF 445
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFF 52
AH K+K + KK WS+ + +F
Sbjct: 656 AHLKDKKKIRAKKRWSQCMYMYF 678
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFF 52
AH K+K + KK WS+ + +F
Sbjct: 656 AHLKDKKKIRAKKRWSQCMYMYF 678
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFFF--SKILRIPYS 22
AH K+K + +K WS+ + ++ +++ +P S
Sbjct: 684 AHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPIS 718
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFFF--SKILRIPYS 22
AH K+K + +K WS+ + ++ +++ +P S
Sbjct: 684 AHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPIS 718
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFFF--SKILRIPYS 22
AH K+K + +K WS+ + ++ +++ +P S
Sbjct: 684 AHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPIS 718
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 120 AHFKNKCSNKLKKAWSRFLVYFFF--SKILRIPYS 22
AH K+K + +K WS+ + ++ +++ +P S
Sbjct: 684 AHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPIS 718
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 22.2 bits (45), Expect = 5.5
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 426 YDKLLFSWTRGRGYDVFARLSTVVG*N*DL*LLY*LNPHYRSKRSNRPILFSIMITVLFT 605
YD L ++ G GYD+ AR + L LN H ++ + + I T
Sbjct: 69 YDPALAAYGYGAGYDLAARRKNATRES-TATLKAWLNEHKKNPYPTKGEKIMLAIITKMT 127
Query: 606 LTKV 617
LT+V
Sbjct: 128 LTQV 131
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 798 ECRDLLYETNTTISNANKKNYLFIY 724
E D L+E NTT+ N++ F Y
Sbjct: 801 EICDFLHEDNTTLVWDNEQQVPFAY 825
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 141 QNNKNYSAHFKNKCS 97
Q N NYS++ K CS
Sbjct: 84 QQNSNYSSNSKPDCS 98
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,681
Number of Sequences: 336
Number of extensions: 3801
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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