Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B23
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    25   0.92 
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    25   0.92 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.8  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    23   3.7  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    23   3.7  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   3.7  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   3.7  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   3.7  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   3.7  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   3.7  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   3.7  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   3.7  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   3.7  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   8.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   8.6  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWNVEISYMKLIQPF 759
           + +YNN  N +YN N   +Y KL + +
Sbjct: 94  YNNYNNNYNNNYNNNYNNNYKKLYKNY 120


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWNVEISYMKLIQPF 759
           + +YNN  N +YN N   +Y KL + +
Sbjct: 94  YNNYNNNYNNNYNNNYNNNYKKLYKNY 120


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 147 NTQNNKNYSAHFKNKC 100
           N  NN NY+ ++ N C
Sbjct: 336 NNYNNNNYNNNYNNNC 351


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 100 NNNYNNYKKLYYNIN 114


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 98  NNNYNNYKKLYYNIN 112


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWN 795
           + +YNN K L+YN N
Sbjct: 108 NNNYNNYKKLYYNIN 122


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 839 HKDYNNQKNLHYNWNVEISY 780
           + +YNN  N + N+N ++ Y
Sbjct: 91  YSNYNNYNNNYNNYNKKLYY 110


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 839 HKDYNNQKNLHYN 801
           + +YNN K L+YN
Sbjct: 343 NNNYNNYKKLYYN 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,522
Number of Sequences: 438
Number of extensions: 4380
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)