Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B22
         (936 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230...    31   1.00 
07_03_0613 + 19959206-19959700,19960210-19960657,19960753-199609...    29   4.0  

>08_01_0283 -
           2304024-2304111,2304224-2304343,2304594-2304715,
           2304824-2305096,2305454-2305558,2305635-2305851,
           2306012-2306262,2306518-2306724,2307087-2307351,
           2308655-2308749
          Length = 580

 Score = 31.5 bits (68), Expect = 1.00
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 444 EGCGREGPIRCIFLGEFHPVAGPKISCQFPEDYIS 548
           EG  R  P R   LG+F P+ G + + Q P D+IS
Sbjct: 503 EGRHRFRPFRYRHLGQFAPLGGEQTAAQLPGDWIS 537


>07_03_0613 +
           19959206-19959700,19960210-19960657,19960753-19960940,
           19961317-19961637
          Length = 483

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 576 YIIPKPQIQKCTMTINALGHKIVGYPIRMDNPRYERNVYLFNICFV-CDSGPRQC 737
           Y IPK  +     ++  L   I   P   D  R+E N  +   CFV    GPR C
Sbjct: 370 YHIPKGWMVFTAQSVTHLDANIFPEPSNFDPARFENNSSIPPYCFVPFGGGPRMC 424


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,092,944
Number of Sequences: 37544
Number of extensions: 450065
Number of successful extensions: 1018
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)