Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B22
         (936 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC056861-1|AAH56861.1|  380|Homo sapiens tumor suppressor candid...   112   2e-24
AF040707-1|AAC62535.1|  380|Homo sapiens candidate tumor suppres...   112   2e-24
AC002481-3|AAB67310.1|  380|Homo sapiens WUGSC:H_LUCA12.3 protein.    112   2e-24
BC021984-1|AAH21984.1|  380|Homo sapiens tumor suppressor candid...   108   3e-23

>BC056861-1|AAH56861.1|  380|Homo sapiens tumor suppressor candidate
           4 protein.
          Length = 380

 Score =  112 bits (269), Expect = 2e-24
 Identities = 47/104 (45%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
 Frame = +3

Query: 468 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 647
           I CIF  EFHP  GPKI+ Q PED+IS+E+FD++  YII KP++Q   +T+ A+  K++G
Sbjct: 7   IECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66

Query: 648 YPIRMDNPRYERNVYLFNICFVCDSGPRQCSMS-CCQKLGEHLT 776
            P+ +++ +Y RN  LFN+ FVCD+  + C++    +KL  +LT
Sbjct: 67  CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLT 110


>AF040707-1|AAC62535.1|  380|Homo sapiens candidate tumor suppressor
           gene 21 protein isoform I protein.
          Length = 380

 Score =  112 bits (269), Expect = 2e-24
 Identities = 47/104 (45%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
 Frame = +3

Query: 468 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 647
           I CIF  EFHP  GPKI+ Q PED+IS+E+FD++  YII KP++Q   +T+ A+  K++G
Sbjct: 7   IECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66

Query: 648 YPIRMDNPRYERNVYLFNICFVCDSGPRQCSMS-CCQKLGEHLT 776
            P+ +++ +Y RN  LFN+ FVCD+  + C++    +KL  +LT
Sbjct: 67  CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLT 110


>AC002481-3|AAB67310.1|  380|Homo sapiens WUGSC:H_LUCA12.3 protein.
          Length = 380

 Score =  112 bits (269), Expect = 2e-24
 Identities = 47/104 (45%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
 Frame = +3

Query: 468 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 647
           I CIF  EFHP  GPKI+ Q PED+IS+E+FD++  YII KP++Q   +T+ A+  K++G
Sbjct: 7   IECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66

Query: 648 YPIRMDNPRYERNVYLFNICFVCDSGPRQCSMS-CCQKLGEHLT 776
            P+ +++ +Y RN  LFN+ FVCD+  + C++    +KL  +LT
Sbjct: 67  CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLT 110


>BC021984-1|AAH21984.1|  380|Homo sapiens tumor suppressor candidate
           4 protein.
          Length = 380

 Score =  108 bits (259), Expect = 3e-23
 Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = +3

Query: 468 IRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHKIVG 647
           I CIF  EFH   GPKI+ Q PED+IS+E+FD++  YII KP++Q   +T+ A+  K++G
Sbjct: 7   IECIFFSEFHLTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKLIG 66

Query: 648 YPIRMDNPRYERNVYLFNICFVCDSGPRQCSMS-CCQKLGEHLT 776
            P+ +++ +Y RN  LFN+ FVCD+  + C++    +KL  +LT
Sbjct: 67  CPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLT 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,731,841
Number of Sequences: 237096
Number of extensions: 2540555
Number of successful extensions: 4295
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4295
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)