Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B22
         (936 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051914-1|AAK93338.1|  412|Drosophila melanogaster LD40282p pro...   134   2e-31
AE014298-2495|AAF48677.1|  412|Drosophila melanogaster CG9104-PA...   134   2e-31
AE014134-1826|AAF52902.1|  460|Drosophila melanogaster CG13138-P...    31   3.0  
AE014134-1825|AAN10742.1|  549|Drosophila melanogaster CG13138-P...    31   3.0  
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA...    30   4.0  

>AY051914-1|AAK93338.1|  412|Drosophila melanogaster LD40282p
           protein.
          Length = 412

 Score =  134 bits (323), Expect = 2e-31
 Identities = 61/107 (57%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
 Frame = +3

Query: 459 EGPIRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHK 638
           EG IRCIFL EFH  AG KISCQ P++YISK+VFD+I+ YIIPK  +Q+C +T+NA+  K
Sbjct: 37  EGKIRCIFLSEFHATAGCKISCQVPDNYISKDVFDAINVYIIPKQHLQRCILTVNAMDVK 96

Query: 639 IVGYPIRM-DNPRYERNVYLFNICFVCDSGPRQCSMS-CCQKLGEHL 773
           IVGYP+ + D  +Y RN +LFN+CFVCDS  R        +KL E+L
Sbjct: 97  IVGYPVGIQDQQKYARNAFLFNLCFVCDSRARSVQYEPVVKKLSEYL 143


>AE014298-2495|AAF48677.1|  412|Drosophila melanogaster CG9104-PA
           protein.
          Length = 412

 Score =  134 bits (323), Expect = 2e-31
 Identities = 61/107 (57%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
 Frame = +3

Query: 459 EGPIRCIFLGEFHPVAGPKISCQFPEDYISKEVFDSISAYIIPKPQIQKCTMTINALGHK 638
           EG IRCIFL EFH  AG KISCQ P++YISK+VFD+I+ YIIPK  +Q+C +T+NA+  K
Sbjct: 37  EGKIRCIFLSEFHATAGCKISCQVPDNYISKDVFDAINVYIIPKQHLQRCILTVNAMDVK 96

Query: 639 IVGYPIRM-DNPRYERNVYLFNICFVCDSGPRQCSMS-CCQKLGEHL 773
           IVGYP+ + D  +Y RN +LFN+CFVCDS  R        +KL E+L
Sbjct: 97  IVGYPVGIQDQQKYARNAFLFNLCFVCDSRARSVQYEPVVKKLSEYL 143


>AE014134-1826|AAF52902.1|  460|Drosophila melanogaster CG13138-PA,
           isoform A protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 501 VAGPKISCQFPEDYISKEVFDS-ISAYIIPKPQIQKCTMTINALGHKIVGYP 653
           V    I  QF  DY++K  FDS  +   +PK  I+  +   + +  K+VG P
Sbjct: 334 VTKSSIDPQFKHDYVTKSSFDSQYNQEYVPKTSIESTSPGRDGVSLKLVGPP 385


>AE014134-1825|AAN10742.1|  549|Drosophila melanogaster CG13138-PB,
           isoform B protein.
          Length = 549

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 501 VAGPKISCQFPEDYISKEVFDS-ISAYIIPKPQIQKCTMTINALGHKIVGYP 653
           V    I  QF  DY++K  FDS  +   +PK  I+  +   + +  K+VG P
Sbjct: 423 VTKSSIDPQFKHDYVTKSSFDSQYNQEYVPKTSIESTSPGRDGVSLKLVGPP 474


>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
           protein.
          Length = 3111

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = -3

Query: 733 CLGPLSHTKQILKRYTLRSYLGLSMRIGYPTILCPS-AFMVIVHF--CICGLGMMYALI 566
           C GP     Q   +  L  Y   +  +GY  +  PS  F+  VHF   I G  M+ ALI
Sbjct: 160 CTGPAGSINQAKLKRILLGYARYNPEVGYCQVSAPSRIFVCCVHFTHIIQGFNMLGALI 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,819,947
Number of Sequences: 53049
Number of extensions: 790928
Number of successful extensions: 1752
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4628299878
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)