Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B22
         (936 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61949-9|AAB03156.3|  433|Caenorhabditis elegans Hypothetical pr...    49   6e-06
U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical p...    30   2.7  
Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>U61949-9|AAB03156.3|  433|Caenorhabditis elegans Hypothetical
           protein F49E8.1 protein.
          Length = 433

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
 Frame = +3

Query: 477 IFLGEFHPVAGPKISCQFPEDYISKEV-FDSISAYIIPKPQI--QKCTMTINALGHKIVG 647
           I L EFH   G  I    P++    E  F      IIPKP +     ++TI +L  K++ 
Sbjct: 40  ILLAEFHNTLGAIIKHSVPKENNKVEATFHFTKGLIIPKPSMFRNSFSLTIKSLRCKVLM 99

Query: 648 YPIRMDNPRYERNVYLFNICFVCD--SGPRQCSMSCCQKLGEHL 773
           +P+ +D+  YER  + F++ F+ D  S          QK  E+L
Sbjct: 100 FPVGIDHKSYERGRFTFDMAFIVDMTSSAETMYEPIVQKCAEYL 143


>U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical
           protein F21C10.4 protein.
          Length = 196

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 699 NICFVCDSGPRQCSMSCCQKLGEHL 773
           +I F C S  R C M CC  +G+ L
Sbjct: 152 SITFGCGSSERCCGMECCNNIGDWL 176


>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 458 GRPNSMYIPRGIPPCRRPKDFMPVPG 535
           G P +   PRG PP   P  +MP PG
Sbjct: 154 GMPGAYPPPRGYPPAPAPGVYMPPPG 179


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 458 GRPNSMYIPRGIPPCRRPKDFMPVPG 535
           G P +   PRG PP   P  +MP PG
Sbjct: 154 GMPGAYPPPRGYPPAPAPGVYMPPPG 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,526,397
Number of Sequences: 27780
Number of extensions: 419670
Number of successful extensions: 900
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)