Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B21
(916 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 161 2e-38
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 135 1e-30
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 128 1e-28
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 107 3e-22
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 103 6e-21
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 99 8e-20
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 92 2e-17
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 91 5e-17
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 85 3e-15
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 83 1e-14
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 81 4e-14
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 78 3e-13
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 74 6e-12
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 73 8e-12
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 73 1e-11
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 71 5e-11
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 68 3e-10
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 68 3e-10
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 68 4e-10
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 64 5e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 6e-09
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 63 1e-08
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 61 3e-08
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 60 1e-07
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 58 3e-07
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 51 4e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 3e-04
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 47 6e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 45 0.002
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 42 0.017
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 39 0.20
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 36 1.1
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 1.9
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 35 3.3
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 3.3
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 33 7.7
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 161 bits (391), Expect = 2e-38
Identities = 80/110 (72%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 87 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 263
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 264 HAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
HA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 60 HAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 135 bits (327), Expect = 1e-30
Identities = 71/109 (65%), Positives = 83/109 (76%)
Frame = +3
Query: 87 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 266
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 267 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 128 bits (310), Expect = 1e-28
Identities = 61/77 (79%), Positives = 66/77 (85%)
Frame = +3
Query: 183 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 362
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 363 AKRKREELSNVLAQMRK 413
AKRKREELSN+L QM K
Sbjct: 63 AKRKREELSNILTQMGK 79
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 107 bits (258), Expect = 3e-22
Identities = 55/103 (53%), Positives = 72/103 (69%)
Frame = +3
Query: 105 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 284
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 285 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
+E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 103 bits (247), Expect = 6e-21
Identities = 56/106 (52%), Positives = 69/106 (65%)
Frame = +3
Query: 93 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 272
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 273 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 410
YEKR ELLKV KDKRALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 56 YEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 99 bits (238), Expect = 8e-20
Identities = 55/100 (55%), Positives = 66/100 (66%)
Frame = +3
Query: 111 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 290
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 291 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 410
ELLKV KDKRALK KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 92.3 bits (219), Expect = 2e-17
Identities = 54/116 (46%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Frame = +3
Query: 75 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 254
+ +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 255 VVGHAQYEKRAMELLK---VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
V G A YE+ +EL+K S KRALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 58 VCGFAPYERHMIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 90.6 bits (215), Expect = 5e-17
Identities = 51/112 (45%), Positives = 67/112 (59%)
Frame = +3
Query: 78 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREV 257
S A R + G+ KG TT I RP+ KGL+T+ FVR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142
Query: 258 VGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
G + YEKR MELL+ SKDK+A K K+RLGT +R+KRK EELS V+ + R+
Sbjct: 143 AGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 84.6 bits (200), Expect = 3e-15
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +3
Query: 159 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 338
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 339 RRLGTHIRAKRKREELSNVLAQMR 410
+RLGT RAK K EEL++V+ R
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 82.6 bits (195), Expect = 1e-14
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +3
Query: 213 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 392
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE+++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 393 VLAQMR 410
L R
Sbjct: 88 ALRSKR 93
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 81.0 bits (191), Expect = 4e-14
Identities = 51/109 (46%), Positives = 65/109 (59%)
Frame = +3
Query: 87 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 266
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 267 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
Y+ + L KVS DK A KF+K+R+G HI KRK EELS V+A MRK
Sbjct: 51 MSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 78.2 bits (184), Expect = 3e-13
Identities = 45/109 (41%), Positives = 67/109 (61%)
Frame = +3
Query: 87 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 266
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 267 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
+ YE+R ++L++ S +KRA K K+RLG+ RAK K EE++N++A R+
Sbjct: 51 SPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 73.7 bits (173), Expect = 6e-12
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = +3
Query: 276 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 73.3 bits (172), Expect = 8e-12
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +3
Query: 93 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 272
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 273 YEKRAMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
YEKR +EL+KV KR+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 57 YEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 72.9 bits (171), Expect = 1e-11
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +3
Query: 144 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 320
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 321 ALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
ALKF+++ LGTHI AKRK ELSNVLA R+
Sbjct: 75 ALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 70.5 bits (165), Expect = 5e-11
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = +3
Query: 93 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 272
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 273 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 380
YEKR ELLKV KDKRALK + ++G H + ++ E
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 68.1 bits (159), Expect = 3e-10
Identities = 42/111 (37%), Positives = 60/111 (54%)
Frame = +3
Query: 81 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 260
E PR I G KG+KTT+ A R D+ L K + V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 261 GHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
G + E+R ELL+V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 57 GFSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 68.1 bits (159), Expect = 3e-10
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = +3
Query: 96 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 275
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 276 EKRAMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
EKR +EL K + KD K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 56 EKRIIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 67.7 bits (158), Expect = 4e-10
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +3
Query: 216 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 386
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 387 SNVLAQMRK 413
V+ R+
Sbjct: 116 QKVVILQRR 124
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 64.1 bits (149), Expect = 5e-09
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +3
Query: 204 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 383
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 384 LSNV 395
++N+
Sbjct: 95 IANI 98
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 6e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 297 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 392
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 62.9 bits (146), Expect = 1e-08
Identities = 37/107 (34%), Positives = 55/107 (51%)
Frame = +3
Query: 93 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 272
PR I G KGH TT+ + + P + KH + V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55
Query: 273 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 413
EKR E L+V K+KRALK+ K+RLG AK+KR ++ L K
Sbjct: 56 LEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +3
Query: 222 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 389
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 59.7 bits (138), Expect = 1e-07
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 359
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 360 RAKRKREELSNVLAQ 404
RA +K L V+ +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +3
Query: 135 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 305
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 306 SKDKRALKFLKRRLGTHIRA 365
+DK AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 51.2 bits (117), Expect = 4e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 105 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 284
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 285 AMELLKV 305
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 48.4 bits (110), Expect = 3e-04
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 171 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 320
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +3
Query: 213 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 389
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 390 NVLAQ 404
+L +
Sbjct: 102 RMLLE 106
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +3
Query: 303 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 410
V+K + L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 42.3 bits (95), Expect = 0.017
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 216 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 395
TK V D++RE G YE+ M+LL+ DK+AL + K+ + + E SNV
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 396 LAQMRK 413
L + K
Sbjct: 85 LLEAIK 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 213 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 389
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K + ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 390 NVL 398
++L
Sbjct: 69 HIL 71
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 36.3 bits (80), Expect = 1.1
Identities = 28/94 (29%), Positives = 48/94 (51%)
Frame = +3
Query: 123 KGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 302
K KT + + G++ I D ++ + K + K+ R+LV + +AME ++
Sbjct: 50 KWTKTHRAARGKEMIVDSSLVLSQFAKK--RNTPVKYDRNLVAATI-------KAMERVE 100
Query: 303 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 404
+ +R F KRRLG + +RKREE V+A+
Sbjct: 101 EIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.5 bits (78), Expect = 1.9
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 219 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 386
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.7 bits (76), Expect = 3.3
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 444 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 325
+G GD P + P SS + RC L SSWR I +RT+
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 3.3
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 87 MAPRFEIAVGLRKGHKTTK 143
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 33.5 bits (73), Expect = 7.7
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 195 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 362
ARL+ L+T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 363 AKRKREEL 386
A+R REEL
Sbjct: 592 AERLREEL 599
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,925,250
Number of Sequences: 1657284
Number of extensions: 6822874
Number of successful extensions: 17182
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 16921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17164
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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