Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B20
(952 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.016
SB_56031| Best HMM Match : Lectin_C (HMM E-Value=3.3e-08) 33 0.34
SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 33 0.34
SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06) 32 0.59
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20) 30 3.2
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074) 29 5.5
SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +1
Query: 286 WLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNE 465
W+ AR++CR+ DLVSL T++EN +V + I Y WT + G N DL
Sbjct: 1465 WMEARDFCRKSRGDLVSLRTANENAFVFSEI--KTRYYYWTV-----WIGLN--DLGTEG 1515
Query: 466 INGWFWTAELQKLAPTTNRQQNDWS 540
+N W + + + N++ N+W+
Sbjct: 1516 VNTWSDGSPMSYI-NWGNKEPNNWN 1539
>SB_56031| Best HMM Match : Lectin_C (HMM E-Value=3.3e-08)
Length = 129
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 226 DNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKA 372
D+ ++F + L VEE W +A CR R LV + ENE++++
Sbjct: 3 DSSWHYFDGKCYFLSTVEEPWTAAERSCRVRGSTLVIVNNLMENEFIRS 51
>SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 33.1 bits (72), Expect = 0.34
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 226 DNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKA 372
D+ ++F + L VEE W +A CR R LV + ENE++++
Sbjct: 60 DSSWHYFDGKCYFLSTVEEPWTAAERSCRVRGSTLVIVNNLMENEFIRS 108
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 33.1 bits (72), Expect = 0.34
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 286 WLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIW 405
W SA C ++ LV++E S E VK+ + ++K Y W
Sbjct: 167 WESAVQRCTEQFASLVTIENSIEEAMVKSMLTENKRNYTW 206
>SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06)
Length = 583
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 217 RYADNKG-YFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVK 369
RY +G Y+++ + EE W + YC + DL + +ENE+++
Sbjct: 91 RYKCKQGWYYYNGKCYHYSSFEETWTQGQRYCLDQDADLAIINDREENEFIR 142
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 280 EDWLSARNYCRQRCMDLVSLETSDENEWVKARI 378
E W R C+ + DLVS+ET E +VK+ +
Sbjct: 869 ESWAEGRKTCQSKGGDLVSIETDGEWSYVKSLV 901
>SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +1
Query: 232 KGYFFSWRDPALRGV--EEDWLS---ARNYCRQR-CMDLVSLETSDENEWVKARI 378
+G+ F D + + V +DW + A C+Q LVS+ET DEN W+ RI
Sbjct: 122 RGFVFERGDFSYKIVLARDDWRTFYEAEQICQQEEDGHLVSIETRDENNWINDRI 176
>SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20)
Length = 753
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 514 TNRQQNDWSEGGGIGKP-QPDNRELIQGGASEHCVAILNNFYNDGVHWARRRLPPPQTIR 690
T R++ D KP +P+ R + G S+H Y + V +R R P PQ
Sbjct: 266 TQREERDRHRRPQSAKPREPNRRRTVTFGESDHDTR--QKSYQESVPESRVRAPSPQYST 323
Query: 691 LRRKRRPPQYVRYTST 738
R + PP R +S+
Sbjct: 324 PRSRIPPPIPPRISSS 339
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 286 WLSARNYCRQRCMDLVSLETSDENEWVKARI 378
W R C+ R DLVS+ET +E ++ +I
Sbjct: 370 WTENREKCKSRNGDLVSMETEEEWSFINKKI 400
>SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074)
Length = 643
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +1
Query: 214 ERYADNK-GYFFSWRDPALRGV---EEDWLSARNYCRQRCMDLVSLETSDENEWVKARI 378
ER+ + + G+ W D + +W + R YC DLVS+ET + ++++ I
Sbjct: 5 ERHEEERHGHAVRWHDGKIYAFIANGSEWKANRKYCLAHNGDLVSIETEKKWQFIRDEI 63
>SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 651 LGTTSPATTANHSFAKKTTPSSIRQIYIYLDYCMIL 758
L + PA+T S KTTP+ ++ Y++L Y +L
Sbjct: 1015 LPASEPASTLRRSTRLKTTPTHLKD-YVFLKYITLL 1049
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,682,220
Number of Sequences: 59808
Number of extensions: 623745
Number of successful extensions: 1725
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2788625034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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