Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B17
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0809 - 21426670-21426753,21427188-21427317,21427403-214274...   101   1e-21
08_01_1061 - 10804269-10804352,10804464-10804593,10804696-108047...    54   2e-07
08_02_1288 + 25902264-25902431,25902506-25903090                       29   6.7  

>08_02_0809 -
           21426670-21426753,21427188-21427317,21427403-21427452,
           21428209-21428349,21428907-21429047,21429144-21429251
          Length = 217

 Score =  101 bits (241), Expect = 1e-21
 Identities = 47/87 (54%), Positives = 60/87 (68%)
 Frame = +3

Query: 267 YGSGSGQQSVTAVEVSDDNNSHWLVRPMTGETCKRGAPIKCNTNIRLQHVATKKNLHSHF 446
           YGSGSGQQSVT     DD+NS+W+VRP    + K+G  I+  + IRLQH+ T+K LHSH 
Sbjct: 61  YGSGSGQQSVTGFPEVDDSNSYWIVRPSPDSSAKQGDAIETGSIIRLQHMRTRKWLHSHL 120

Query: 447 FTSPLSGNQXVSCYGXXXGEXDSGNNW 527
             SPLSGN  VSC+G   G+ D+G+ W
Sbjct: 121 HASPLSGNLEVSCFG-GDGQSDTGDYW 146


>08_01_1061 -
           10804269-10804352,10804464-10804593,10804696-10804745,
           10805154-10805216,10806235-10806375,10806541-10806925,
           10807735-10808339
          Length = 485

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = +3

Query: 267 YGSGSGQQSVTAVEVSDDNNSHWLVRPMTGETCKRGAPIKCNT 395
           YGSGSGQQSVT+    DD+NS+W+VRP    + K+G PI   T
Sbjct: 355 YGSGSGQQSVTSFPNVDDSNSYWIVRPQPDTSAKQGDPITHGT 397


>08_02_1288 + 25902264-25902431,25902506-25903090
          Length = 250

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 24  YSGLPXXLWFFWLSXACFCSQXM 92
           Y+G+P  LW F    AC CS  M
Sbjct: 191 YAGVPLLLWIFGPVLACLCSVVM 213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,247,769
Number of Sequences: 37544
Number of extensions: 274562
Number of successful extensions: 447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)