Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B15
         (1018 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000660925 Cluster: Importin beta-1 subunit (Karyoph...    43   0.011
UniRef50_Q4SUR3 Cluster: Chromosome undetermined SCAF13844, whol...    43   0.011
UniRef50_Q14974 Cluster: Importin subunit beta-1; n=35; Eumetazo...    40   0.14 
UniRef50_Q4N5V6 Cluster: Putative uncharacterized protein; n=3; ...    33   8.9  

>UniRef50_UPI0000660925 Cluster: Importin beta-1 subunit
           (Karyopherin beta-1 subunit) (Nuclear factor P97)
           (Importin 90).; n=1; Takifugu rubripes|Rep: Importin
           beta-1 subunit (Karyopherin beta-1 subunit) (Nuclear
           factor P97) (Importin 90). - Takifugu rubripes
          Length = 937

 Score = 43.2 bits (97), Expect = 0.011
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +2

Query: 224 LTLIQILEKTVSPDRNELEAAVRYLE 301
           + LI ILEKTVSPDRNELEAA ++LE
Sbjct: 1   MELITILEKTVSPDRNELEAAQKFLE 26


>UniRef50_Q4SUR3 Cluster: Chromosome undetermined SCAF13844, whole
           genome shotgun sequence; n=3; Bilateria|Rep: Chromosome
           undetermined SCAF13844, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 985

 Score = 43.2 bits (97), Expect = 0.011
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +2

Query: 224 LTLIQILEKTVSPDRNELEAAVRYLE 301
           + LI ILEKTVSPDRNELEAA ++LE
Sbjct: 1   MELITILEKTVSPDRNELEAAQKFLE 26


>UniRef50_Q14974 Cluster: Importin subunit beta-1; n=35;
           Eumetazoa|Rep: Importin subunit beta-1 - Homo sapiens
           (Human)
          Length = 876

 Score = 39.5 bits (88), Expect = 0.14
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +2

Query: 224 LTLIQILEKTVSPDRNELEAAVRYLE 301
           + LI ILEKTVSPDR ELEAA ++LE
Sbjct: 1   MELITILEKTVSPDRLELEAAQKFLE 26


>UniRef50_Q4N5V6 Cluster: Putative uncharacterized protein; n=3;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 667

 Score = 33.5 bits (73), Expect = 8.9
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +3

Query: 138 GFYFSKNRIESVFCNINLRIVKQCTQKQH*RLYKYLRRQFHLIEMNWKQQLDTSN 302
           GF    NRI S  CN+   + ++   K+   + KY R Q  L  MNWK++L+  N
Sbjct: 611 GFEDVMNRITSP-CNLMEELREKSVDKKDDTMGKYEREQKVLDSMNWKERLNYGN 664


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,830,293
Number of Sequences: 1657284
Number of extensions: 8932950
Number of successful extensions: 20736
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20717
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 96755564499
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)