Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B15
         (1018 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118657-1|AAM50026.1|  884|Drosophila melanogaster SD08803p pro...    39   0.013
AJ002729-1|CAA05691.2|  884|Drosophila melanogaster importin bet...    39   0.013
AF222745-1|AAF34680.1|  884|Drosophila melanogaster importin bet...    39   0.013
AE014134-3276|AAF53918.1|  884|Drosophila melanogaster CG2637-PA...    39   0.013
M32659-1|AAA28896.1|  924|Drosophila melanogaster protein ( D.me...    30   4.4  
AF084525-1|AAC33365.1|  955|Drosophila melanogaster delayed rect...    30   4.4  
AE014296-522|ABI31231.1| 1011|Drosophila melanogaster CG1066-PC,...    30   4.4  
AE014296-521|AAG22233.1|  985|Drosophila melanogaster CG1066-PA,...    30   4.4  
AE014296-520|AAG22232.2| 1015|Drosophila melanogaster CG1066-PB,...    30   4.4  

>AY118657-1|AAM50026.1|  884|Drosophila melanogaster SD08803p
           protein.
          Length = 884

 Score = 38.7 bits (86), Expect = 0.013
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +2

Query: 206 MHAETTLTLIQILEKTVSPDRNELEAAVRYLE 301
           M ++  + LI ILEKTVSPD+NEL +A  +LE
Sbjct: 1   MTSDIAMQLIAILEKTVSPDKNELLSAKNFLE 32


>AJ002729-1|CAA05691.2|  884|Drosophila melanogaster importin beta
           protein.
          Length = 884

 Score = 38.7 bits (86), Expect = 0.013
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +2

Query: 206 MHAETTLTLIQILEKTVSPDRNELEAAVRYLE 301
           M ++  + LI ILEKTVSPD+NEL +A  +LE
Sbjct: 1   MTSDIAMQLIAILEKTVSPDKNELLSAKNFLE 32


>AF222745-1|AAF34680.1|  884|Drosophila melanogaster importin beta
           protein.
          Length = 884

 Score = 38.7 bits (86), Expect = 0.013
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +2

Query: 206 MHAETTLTLIQILEKTVSPDRNELEAAVRYLE 301
           M ++  + LI ILEKTVSPD+NEL +A  +LE
Sbjct: 1   MTSDIAMQLIAILEKTVSPDKNELLSAKNFLE 32


>AE014134-3276|AAF53918.1|  884|Drosophila melanogaster CG2637-PA
           protein.
          Length = 884

 Score = 38.7 bits (86), Expect = 0.013
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +2

Query: 206 MHAETTLTLIQILEKTVSPDRNELEAAVRYLE 301
           M ++  + LI ILEKTVSPD+NEL +A  +LE
Sbjct: 1   MTSDIAMQLIAILEKTVSPDKNELLSAKNFLE 32


>M32659-1|AAA28896.1|  924|Drosophila melanogaster protein (
           D.melanogaster Shab11protein mRNA, complete cds. ).
          Length = 924

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 YLEPCCHHKFHNIHQNV 343
           YLE CC HK+H   +NV
Sbjct: 374 YLESCCQHKYHQRKENV 390


>AF084525-1|AAC33365.1|  955|Drosophila melanogaster delayed
           rectifier potassium channelprotein.
          Length = 955

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 YLEPCCHHKFHNIHQNV 343
           YLE CC HK+H   +NV
Sbjct: 374 YLESCCQHKYHQRKENV 390


>AE014296-522|ABI31231.1| 1011|Drosophila melanogaster CG1066-PC,
           isoform C protein.
          Length = 1011

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 YLEPCCHHKFHNIHQNV 343
           YLE CC HK+H   +NV
Sbjct: 404 YLESCCQHKYHQRKENV 420


>AE014296-521|AAG22233.1|  985|Drosophila melanogaster CG1066-PA,
           isoform A protein.
          Length = 985

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 YLEPCCHHKFHNIHQNV 343
           YLE CC HK+H   +NV
Sbjct: 404 YLESCCQHKYHQRKENV 420


>AE014296-520|AAG22232.2| 1015|Drosophila melanogaster CG1066-PB,
           isoform B protein.
          Length = 1015

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 YLEPCCHHKFHNIHQNV 343
           YLE CC HK+H   +NV
Sbjct: 404 YLESCCQHKYHQRKENV 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,421,211
Number of Sequences: 53049
Number of extensions: 441640
Number of successful extensions: 1041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5181238359
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)