Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B13
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 34 0.13
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 33 0.40
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 0.41
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 31 1.6
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 31 1.6
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 3.7
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.7
09_02_0603 - 11150739-11150746,11150791-11151340 29 4.9
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 29 6.5
09_02_0495 + 9880714-9881196 29 6.5
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 6.5
02_04_0382 - 22501041-22501279,22501717-22501810 29 6.5
11_01_0553 - 4368233-4368320,4368427-4368514,4368595-4368668,436... 28 8.6
07_01_0080 + 587674-588510 28 8.6
01_06_1612 - 38635703-38636215,38638725-38638967 28 8.6
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 719 PPPPPXXKKKXKXXXXGXPRPPPLKKXXXXFPP 817
PPPPP + G P PPPL+K PP
Sbjct: 178 PPPPPEAHHRPTKSYTGHPPPPPLEKDAPPQPP 210
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 585 PPPPXPKXXXXFFXGG-GGGXXPKXPPPXXGG 493
PPPP PK + GG GGG PP GG
Sbjct: 127 PPPPKPKPCECTYCGGHGGGCNKPAVPPCAGG 158
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 585 PPPPXPKXXXXFFXGGGGGXXPKXPPP 505
PPPP GGGGG + PPP
Sbjct: 11 PPPPPQHPPPPQAGGGGGGEFYRGPPP 37
Score = 26.6 bits (56), Expect(2) = 0.41
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 530 PPPPPXKXXXXXLGXGGGG 586
PPPPP G GGGG
Sbjct: 11 PPPPPQHPPPPQAGGGGGG 29
Score = 24.6 bits (51), Expect(2) = 0.41
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 692 GXGGXFFXXPPPPPXXKK 745
G GG F+ PPP P ++
Sbjct: 26 GGGGEFYRGPPPQPPMRQ 43
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 494 PPXXGGGXFGXXPPPPPXKXXXXXLGXGGGGF 589
PP F PPPPP GGGGF
Sbjct: 67 PPPPPAAFFAAVPPPPPPPFEYYPAVGGGGGF 98
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 719 PPPPPXXKKKXKXXXXGXPRPPPLKKXXXXFPP 817
PPPPP + + + P+PPP K+ PP
Sbjct: 173 PPPPPAPEPEPEPPKKEEPQPPPPKEEEKPEPP 205
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 719 PPPPPXXKKKXKXXXXGXPRPPPLKK 796
PPPPP + K K P PPP K
Sbjct: 1934 PPPPPPVEGKPKPPPHAPPPPPPEAK 1959
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 719 PPPPPXXKKKXKXXXXGXPRPPPLKKXXXXFPP 817
PPPPP G P PPP K PP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 630 PXXGXXXXXPXXGXKPPPPXPKXXXXFFXGGGGGXXPKXPPPXXGG 493
P G P G PPPP P GG G P PPP GG
Sbjct: 349 PAKGPPPPPPPKGPSPPPPPP-------PGGKKGGPP--PPPPKGG 385
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 719 PPPPPXXKKKXKXXXXGXPRPPPLKKXXXXFPP 817
PPPPP K P PPP K PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 719 PPPPPXXKKKXKXXXXGXPRPPPLKKXXXXFPP 817
PPPPP G P PPP K PP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 710 FXXPPPPPXXKKKXKXXXXGXPRPPPL 790
F PPPPP G P PPPL
Sbjct: 41 FGFPPPPPPGSTFVPLPQSGVPPPPPL 67
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -2
Query: 585 PPPPXP---KXXXXFFXGGGGGXXPKXPPPXXGG 493
PPPP P + + GGG G PPP GG
Sbjct: 322 PPPPPPSAYQGNNPGYQGGGPGYQGGNPPPYQGG 355
>09_02_0495 + 9880714-9881196
Length = 160
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 494 PPXXGGGXFGXXPPPPPXKXXXXXLGXGGGG 586
PP GG PPPPP GG G
Sbjct: 39 PPPIAGGAVNSYPPPPPAGSSSSSSSGGGDG 69
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 494 PPXXGGGXFGXXPPPPPXKXXXXXLGXGGGGFXPXXGXXXFXPKXG 631
PP GG PPPP G G GG G P G
Sbjct: 40 PPIAGGAVNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPPPG 85
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = -2
Query: 603 PXXGXKPPP----PXPKXXXXFFXGGGGGXXPKXPPP 505
P G P P P P GGGGG P PPP
Sbjct: 11 PSPGRSPNPNLNLPCPLPPIPSCGGGGGGAGPTPPPP 47
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 494 PPXXGGGXFGXXPPPPP 544
P GGG +G PPPPP
Sbjct: 87 PYYGGGGGYGKPPPPPP 103
>11_01_0553 -
4368233-4368320,4368427-4368514,4368595-4368668,
4369000-4369160,4369233-4369322,4369406-4369480,
4369569-4369640,4369719-4369891,4369964-4370078,
4370274-4370387,4370582-4370661,4370755-4370842,
4370941-4370997,4371111-4371176,4371254-4371349,
4371459-4371566,4371941-4372039,4372108-4372227,
4372399-4372437,4372940-4373026,4373276-4373347,
4373443-4373509,4374455-4374546,4374631-4374708,
4374785-4374922,4375029-4375164,4375306-4375468,
4375690-4375849,4375950-4376056,4376149-4376259,
4377850-4378159
Length = 1107
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 692 GXGGXFFXXPPPPPXXKKKXKXXXXGXPRPPP 787
G GG PPP P + G P+PPP
Sbjct: 5 GRGGKRRGAPPPGPSGAAAKRAHPGGTPQPPP 36
>07_01_0080 + 587674-588510
Length = 278
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 692 GXGGXFFXXPPPPPXXKKKXKXXXXGXPRPPP 787
G G F PPPPP P PPP
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPP 114
>01_06_1612 - 38635703-38636215,38638725-38638967
Length = 251
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 530 PPPPPXKXXXXXLGXGGGG 586
PPPPP + +G GGGG
Sbjct: 114 PPPPPTQLMVPVVGYGGGG 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,245,427
Number of Sequences: 37544
Number of extensions: 358793
Number of successful extensions: 1897
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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