Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B08
(1029 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.1
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 29 4.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 9.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 9.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 9.4
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 619 PPPPXXSXXXXPPRPPXLXXPPAXPPRXXAXXRRXXXIPXRRRPAXXAP 765
PPPP PPR P PP PP R P R P P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
Score = 31.5 bits (68), Expect = 1.0
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Frame = +1
Query: 619 PPPPXXSXXXX--PPRPPXLXXPPAXPPRXXAXXRRXXXIP-XRRRPAXXAPXXXXXXFA 789
PPPP S PP PP P PPR R P +RRP P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Query: 790 XAPPXXAXXP 819
PP P
Sbjct: 185 RTPPSPIPPP 194
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.0
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -1
Query: 711 GGXXSGGXGRGXXEXXXSWRXXXXXXXGGXGGEXXXXXGIFXXXPPPPXXXERCGFXXXX 532
GG GG G G GG GG G PPPP CG
Sbjct: 70 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGC-APPPPPPACGGGCGGGGGG 128
Query: 531 XSXXPXGGGGXXFXGRXXXPPGG 463
GGGG G GG
Sbjct: 129 CGGGCGGGGGGGCGGGGGGGCGG 151
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 695 GGXAGGXXXXGGLGGXXXXEXXGGGGXXRXXXXGFLXXFPRPPP 564
GG GG GG GG GGGG G P PPP
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -3
Query: 844 GGXWGXXLXGGXXXGG-GRXRXXEXXEXGRXPRGAGXEEXXXXASGXXIXWGGG 686
GG WG GG GG G R G G G + +G WGGG
Sbjct: 65 GGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGG 118
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/89 (25%), Positives = 26/89 (29%)
Frame = -3
Query: 943 GXTGQGDXTNSSRXSXXAXEXXGXXXXAREXDXGGXWGXXLXGGXXXGGGRXRXXEXXEX 764
G G G R G + G WG GG GG R +
Sbjct: 89 GGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGD---- 144
Query: 763 GRXPRGAGXEEXXXXASGXXIXWGGGPGG 677
GR P G+ G GGG GG
Sbjct: 145 GRGPPGSNGGGDWGGNGGGGRGGGGGRGG 173
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 568 GGRGXXXKNPXXXXRLXPPPPXXSXXXXPPRPPXLXXPPAXPP 696
G G P + PPPP PP PP PP PP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGI--PPPPPMFGAPPPPPP 119
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 619 PPPPXXSXXXXPPRPPXLXXPPAXPPRXXA 708
PPPP PP PP + P PP A
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGA 113
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 695 GGXAGGXXXXGGLGGXXXXEXXGGGGXXRXXXXGF 591
GG GG GG GG GGGG GF
Sbjct: 179 GGGGGGSHHHGGGGGGGGHHHHGGGGHYHGGGGGF 213
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 595 PXXXXRLXPPPPXXSXXXXPPRPPXLXXPPAXPP 696
P + PPPP PP PP PP P
Sbjct: 49 PICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/85 (27%), Positives = 24/85 (28%)
Frame = +2
Query: 464 PPGGXXXLPXXXXPPPPXGXXEXXXXXXPHLSXXXGGGGXXXKIPXXXFXSPPXPPXXXX 643
P GG P PPPP L GG P SPP PP
Sbjct: 284 PAGGSPPPPRAGSPPPPP--PPRGSPPTGSLPPPQAGGSP----PPAGTGSPPPPPRQKR 337
Query: 644 XXXLQDXXXSFXPRPXPPXNXPPXG 718
+ P PP PP G
Sbjct: 338 QAPERSPPTGSPPTGSPPTGRPPRG 362
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/85 (27%), Positives = 24/85 (28%)
Frame = +2
Query: 464 PPGGXXXLPXXXXPPPPXGXXEXXXXXXPHLSXXXGGGGXXXKIPXXXFXSPPXPPXXXX 643
P GG P PPPP L GG P SPP PP
Sbjct: 305 PAGGSPPPPRAGSPPPPP--PPRGSPPTGSLPPPQAGGSP----PPAGTGSPPPPPRQKR 358
Query: 644 XXXLQDXXXSFXPRPXPPXNXPPXG 718
+ P PP PP G
Sbjct: 359 QAPERSPPTGSPPTGSPPTGRPPRG 383
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/85 (27%), Positives = 24/85 (28%)
Frame = +2
Query: 464 PPGGXXXLPXXXXPPPPXGXXEXXXXXXPHLSXXXGGGGXXXKIPXXXFXSPPXPPXXXX 643
P GG P PPPP L GG P SPP PP
Sbjct: 290 PAGGSPPPPRAGSPPPPP--PPRGSPPTGSLPPPQAGGSP----PPAGTGSPPPPPRQKR 343
Query: 644 XXXLQDXXXSFXPRPXPPXNXPPXG 718
+ P PP PP G
Sbjct: 344 QAPERSPPTGSPPTGSPPTGRPPRG 368
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 449 PXXXTPPGGXXXLPXXXXPPPPXGXXEXXXXXXPHLSXXXGG-GGXXXKIPXXXFXSPPX 625
P PPGG + PPPP G P GG P F P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 626 PP 631
PP
Sbjct: 786 PP 787
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +3
Query: 294 PXFNXXPPPXXGXXXXT---PXXXVPXXIFXXXGGXPXFXXPXXGXPPIXXGGRXPKXXH 464
P PPP G T P P + GG P P G PPI GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP-PPPPGGLPPI-SGGPPPPPPP 764
Query: 465 PXG 473
P G
Sbjct: 765 PGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 449 PXXXTPPGGXXXLPXXXXPPPPXGXXEXXXXXXPHLSXXXGG-GGXXXKIPXXXFXSPPX 625
P PPGG + PPPP G P GG P F P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 626 PP 631
PP
Sbjct: 786 PP 787
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +3
Query: 294 PXFNXXPPPXXGXXXXT---PXXXVPXXIFXXXGGXPXFXXPXXGXPPIXXGGRXPKXXH 464
P PPP G T P P + GG P P G PPI GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP-PPPPGGLPPI-SGGPPPPPPP 764
Query: 465 PXG 473
P G
Sbjct: 765 PGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 449 PXXXTPPGGXXXLPXXXXPPPPXGXXEXXXXXXPHLSXXXGG-GGXXXKIPXXXFXSPPX 625
P PPGG + PPPP G P GG P F P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 626 PP 631
PP
Sbjct: 369 PP 370
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = +3
Query: 294 PXFNXXPPPXXGXXXXT---PXXXVPXXIFXXXGGXPXFXXPXXGXPPIXXGGRXPKXXH 464
P PPP G T P P + GG P P G PPI GG P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP-PPPPGGLPPI-SGGPPPPPPP 347
Query: 465 PXG 473
P G
Sbjct: 348 PGG 350
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 695 GGXAGGXXXXGGLGGXXXXEXXGGGGXXRXXXXGF 591
GG GG GG GG GGGG GF
Sbjct: 109 GGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGF 143
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 588 QKSXXXXSXXPPXPXXLXAXPSSKTXXXXSPPGPPP 695
Q + S PP P A PSS PP PPP
Sbjct: 488 QPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 565 GGGRGXXXKNPXXXXRLXPPPPXXSXXXXPPRPP 666
GGG G P PPPP PP PP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPP 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,096,648
Number of Sequences: 27780
Number of extensions: 263648
Number of successful extensions: 1331
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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