Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B06
(888 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 187 3e-46
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 168 2e-40
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 142 8e-33
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 123 7e-27
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 116 8e-25
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 75 3e-12
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 63 1e-08
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 62 2e-08
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 60 1e-07
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 57 7e-07
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 56 1e-06
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 53 8e-06
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 51 3e-05
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 51 3e-05
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 50 1e-04
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 49 1e-04
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 48 2e-04
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 46 0.001
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 43 0.012
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 42 0.016
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 42 0.021
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 42 0.028
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 41 0.037
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 41 0.048
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 40 0.085
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.20
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 39 0.20
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 38 0.45
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 36 1.4
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 36 1.8
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 36 1.8
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 36 1.8
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 35 2.4
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 35 3.2
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 35 3.2
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 33 7.4
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 187 bits (456), Expect = 3e-46
Identities = 98/145 (67%), Positives = 106/145 (73%)
Frame = +1
Query: 91 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 270
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 271 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS*XSXRXXTFPXXR 450
QPNSAIRKCVRVQLIKNGKK+TAFVP DG LN IEENDEVL AG P R
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGR-KGHAVGDIPGVR 119
Query: 451 FXGGXKXPXCLXPLS*KEKKXRPRS 525
F L L K KK RPRS
Sbjct: 120 FKVVKVANVSLLALY-KGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 168 bits (408), Expect = 2e-40
Identities = 86/144 (59%), Positives = 101/144 (70%)
Frame = +1
Query: 94 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 273
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 274 PNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS*XSXRXXTFPXXRF 453
PNSAIRKCVRVQLIKNGKKVTAFVP DG LN ++ENDEVL AG P RF
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGR-KGKAKGDIPGVRF 122
Query: 454 XGGXKXPXCLXPLS*KEKKXRPRS 525
L L KEKK +PRS
Sbjct: 123 KVVKVSGVSLLALW-KEKKEKPRS 145
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 142 bits (345), Expect = 8e-33
Identities = 66/102 (64%), Positives = 76/102 (74%)
Frame = +1
Query: 97 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQP 276
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 277 NSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAG 402
NSAI KC RVQL+KNGKK+ AFVP DG LN I+EN V G
Sbjct: 133 NSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPVPPPG 174
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 123 bits (296), Expect = 7e-27
Identities = 59/111 (53%), Positives = 76/111 (68%)
Frame = +1
Query: 121 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 300
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 301 RVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS*XSXRXXTFPXXRF 453
R+QLIKNG+++TAF P DG +N I+E+DEV GI P RF
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRF 119
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 116 bits (279), Expect = 8e-25
Identities = 59/118 (50%), Positives = 75/118 (63%)
Frame = +1
Query: 100 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 279
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 280 SAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS*XSXRXXTFPXXRF 453
+A+RKCVRVQL+KNGK VTAFVP DG LN+I E+DEV+ I P RF
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRF 124
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +1
Query: 100 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 279
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 280 SAIRKCVRVQLIKN 321
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
Score = 54.8 bits (126), Expect = 3e-06
Identities = 29/53 (54%), Positives = 31/53 (58%)
Frame = +1
Query: 295 CVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS*XSXRXXTFPXXRF 453
CVRVQL KNGK VTAFVP DG LN I E+DEV+ I P RF
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRF 638
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 62.9 bits (146), Expect = 1e-08
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = -2
Query: 365 FXQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 228
F QPS GT AVTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 57 FKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/91 (38%), Positives = 46/91 (50%)
Frame = -1
Query: 348 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 169
G E L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L VGFL
Sbjct: 25 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLV 84
Query: 168 FFVRPSLFTTVVHVLTRRSYSSGFTHLDSTT 76
FV P L +V L S ++ HL T
Sbjct: 85 LFVMPLLVPSVTAELPGSSETTTLAHLAGAT 115
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 59.7 bits (138), Expect = 1e-07
Identities = 31/63 (49%), Positives = 47/63 (74%)
Frame = +1
Query: 205 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEEND 384
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G ++++E++
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHN 139
Query: 385 EVL 393
VL
Sbjct: 140 IVL 142
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 56.8 bits (131), Expect = 7e-07
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = -1
Query: 348 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 169
G E L VLNEL+ DA DGR+ L F + ++LC+R +R+ L VGFL
Sbjct: 56 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLV 115
Query: 168 FFVRPSLFTTVVHVLTRRSYSSGFTH 91
FV P L +V L S ++ H
Sbjct: 116 LFVMPLLVPSVTAELPGSSETTTLAH 141
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +1
Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 361 LNHIEENDEVL 393
++++E++ VL
Sbjct: 70 GHNLQEHNVVL 80
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 53.2 bits (122), Expect = 8e-06
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +1
Query: 208 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDE 387
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 388 VLXAGIRS 411
VL G R+
Sbjct: 119 VLVEGGRT 126
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 361 LNHIEENDEVL 393
++++E++ VL
Sbjct: 113 GHNLQEHNIVL 123
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 361 LNHIEENDEVL 393
++++E++ VL
Sbjct: 99 GHNLQEHNIVL 109
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +1
Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 361 LNHIEENDEVL 393
++++E++ VL
Sbjct: 117 GHNLQEHNIVL 127
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/59 (40%), Positives = 42/59 (71%)
Frame = +1
Query: 232 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIR 408
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ VL G R
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRGGR 145
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +1
Query: 217 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLX 396
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VL
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 397 AGIR 408
G R
Sbjct: 129 KGGR 132
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +1
Query: 193 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHI 372
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74
Query: 373 EENDEVLXAGIR 408
+E+ VL G R
Sbjct: 75 QEHSIVLVRGGR 86
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +1
Query: 199 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEE 378
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 379 NDEVLXAGIRS 411
+ VL G R+
Sbjct: 105 HQIVLVEGGRT 115
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 42.7 bits (96), Expect = 0.012
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +1
Query: 58 PSVADWCRAIQMGKPRGIRT-ARKHVNHRREQRWADKEFKKAHMGTKWKANP--FGGASH 228
P+ A + R + M R + R + R + ++ + A TK K++ G
Sbjct: 21 PAKAAFARPVAMPVFRPATSFGRGFASSSRCEATINQIMRGARKSTKRKSSVPLLDGCFQ 80
Query: 229 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAG 402
K + + + ++PNSA+RK RV+L NG+ TA++P +G ++++E+ VL G
Sbjct: 81 KKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVRG 135
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 42.3 bits (95), Expect = 0.016
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +1
Query: 217 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLX 396
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G ++ +E+ VL
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 397 AGIRS 411
G R+
Sbjct: 104 RGGRA 108
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 41.9 bits (94), Expect = 0.021
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = -1
Query: 345 DECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEF 166
+E HFL VL EL++DA ++G V LL F + DDA C +E + L R H F
Sbjct: 70 NESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR-HC-FNVS 127
Query: 165 FVRPSLFTTV 136
+ PSL ++V
Sbjct: 128 CIVPSLLSSV 137
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 41.5 bits (93), Expect = 0.028
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +1
Query: 193 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHI 372
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74
Query: 373 EENDEVLXAGIR 408
+E+ VL G R
Sbjct: 75 QEHAVVLVRGGR 86
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 41.1 bits (92), Expect = 0.037
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +1
Query: 232 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 357
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 40.7 bits (91), Expect = 0.048
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 172 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 351
+K K + G KG+ L+ + K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148
Query: 352 DGXLNHIEENDEVLXAGIRS 411
+G ++I+++ VL G R+
Sbjct: 149 EG--HNIQQHSVVLIRGGRA 166
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 39.9 bits (89), Expect = 0.085
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +1
Query: 250 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS 411
+VG+ + K+PNS RK RV+L GK +TA++P +G ++I+++ VL G RS
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRGGRS 100
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 38.7 bits (86), Expect = 0.20
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 232 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIR 408
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V+ G R
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEGGR 91
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 38.7 bits (86), Expect = 0.20
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +1
Query: 199 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEE 378
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 379 NDEVLXAG 402
+D VL G
Sbjct: 77 HDRVLVRG 84
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 37.5 bits (83), Expect = 0.45
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +1
Query: 172 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 351
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 352 DG 357
+G
Sbjct: 68 EG 69
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 35.9 bits (79), Expect = 1.4
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 190 TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNH 369
TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G +
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73
Query: 370 IEENDEVLXAGIR 408
++E+ VL G R
Sbjct: 74 LQEHSLVLVRGGR 86
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 35.5 bits (78), Expect = 1.8
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 217 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLX 396
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + VL
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 397 AGIR 408
G R
Sbjct: 184 RGGR 187
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 35.5 bits (78), Expect = 1.8
Identities = 29/109 (26%), Positives = 52/109 (47%)
Frame = +1
Query: 82 AIQMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGV 261
A ++ + G T + + H RE++ H + +A G +G+ L
Sbjct: 55 AFRLPQSSGFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTR 103
Query: 262 EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIR 408
K+PNSA+ K +V+L N V A++P +G ++++E+ VL G R
Sbjct: 104 TPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRGGR 149
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 35.5 bits (78), Expect = 1.8
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +1
Query: 217 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLX 396
G KG+ ++ V+ K+PNSA RK +++L + + A++P G ++++E VL
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 397 AGIRS 411
+G R+
Sbjct: 83 SGGRA 87
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 35.1 bits (77), Expect = 2.4
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +1
Query: 187 GTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLN 366
G K +NP K I L+ + + K+PNSA R+ +V+ +K +T +P G +
Sbjct: 22 GKKLNSNP-----QRKVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKH 74
Query: 367 HIEENDEVLXAGIRS 411
+++++ VL G RS
Sbjct: 75 NLQQHSTVLICGGRS 89
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 34.7 bits (76), Expect = 3.2
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 232 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAG 402
+G + + + K+PNSA RK ++L KN KK+ A++P G + + + VL G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRG 81
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 34.7 bits (76), Expect = 3.2
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +1
Query: 235 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIR 408
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ VL G R
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRGGR 86
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 33.5 bits (73), Expect = 7.4
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 268 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAG 402
K+PNSA+RK ++ L N K V A+VP + + I +N VL G
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLIKG 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,105,029
Number of Sequences: 1657284
Number of extensions: 9672137
Number of successful extensions: 20555
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 20191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20546
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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