Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_B06
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p pro...   217   2e-56
AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA...   217   2e-56
M19494-1|AAA28935.1|  140|Drosophila melanogaster protein ( D.me...    51   2e-06
BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p pro...    51   2e-06
AL133505-2|CAB65841.1|  140|Drosophila melanogaster EG:BACH59J11...    51   2e-06
AL133505-1|CAB63528.1|  154|Drosophila melanogaster EG:BACH59J11...    51   2e-06
AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB ...    51   2e-06
AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical kn...    48   1e-05

>AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p
           protein.
          Length = 143

 Score =  217 bits (529), Expect = 2e-56
 Identities = 107/145 (73%), Positives = 115/145 (79%)
 Frame = +1

Query: 91  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 270
           MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1   MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60

Query: 271 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS*XSXRXXTFPXXR 450
           QPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEVL AG            P  R
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGR-KGHAVGDIPGVR 119

Query: 451 FXGGXKXPXCLXPLS*KEKKXRPRS 525
           F         L  L  KEKK RPRS
Sbjct: 120 FKVVKVANVSLLALY-KEKKERPRS 143


>AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA
           protein.
          Length = 143

 Score =  217 bits (529), Expect = 2e-56
 Identities = 107/145 (73%), Positives = 115/145 (79%)
 Frame = +1

Query: 91  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 270
           MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1   MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60

Query: 271 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGXLNHIEENDEVLXAGIRS*XSXRXXTFPXXR 450
           QPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEVL AG            P  R
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGR-KGHAVGDIPGVR 119

Query: 451 FXGGXKXPXCLXPLS*KEKKXRPRS 525
           F         L  L  KEKK RPRS
Sbjct: 120 FKVVKVANVSLLALY-KEKKERPRS 143


>M19494-1|AAA28935.1|  140|Drosophila melanogaster protein (
           D.melanogaster tko (technical knockout) locus mRNA
           encoding tko gene product,complete cds. ).
          Length = 140

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +1

Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 361 LNHIEENDEVL 393
            ++++E++ VL
Sbjct: 99  GHNLQEHNIVL 109


>BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p
           protein.
          Length = 140

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +1

Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 361 LNHIEENDEVL 393
            ++++E++ VL
Sbjct: 99  GHNLQEHNIVL 109


>AL133505-2|CAB65841.1|  140|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 140

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +1

Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 361 LNHIEENDEVL 393
            ++++E++ VL
Sbjct: 99  GHNLQEHNIVL 109


>AL133505-1|CAB63528.1|  154|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 154

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +1

Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 56  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112

Query: 361 LNHIEENDEVL 393
            ++++E++ VL
Sbjct: 113 GHNLQEHNIVL 123


>AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB
           protein.
          Length = 140

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +1

Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 361 LNHIEENDEVL 393
            ++++E++ VL
Sbjct: 99  GHNLQEHNIVL 109


>AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical
           knockout protein protein.
          Length = 140

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 27/71 (38%), Positives = 45/71 (63%)
 Frame = +1

Query: 181 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGX 360
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+    GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR-HSTGKEMVAYIP--GI 98

Query: 361 LNHIEENDEVL 393
            ++++E++ VL
Sbjct: 99  GHNLQEHNIVL 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,225,796
Number of Sequences: 53049
Number of extensions: 446977
Number of successful extensions: 1066
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)