Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B04
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 216 2e-56
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 216 2e-56
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 216 2e-56
04_01_0042 + 473912-474058,474208-474349,474442-476264 212 3e-55
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 162 3e-40
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 137 1e-32
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 128 6e-30
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 120 2e-27
03_06_0406 - 33703767-33704045,33705167-33705226,33705295-337053... 30 2.8
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 29 3.7
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.7
03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,117... 29 4.9
01_06_0580 - 30380260-30380747,30380816-30381107 28 8.6
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 216 bits (528), Expect = 2e-56
Identities = 109/175 (62%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 45 DKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTK 104
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 678
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R
Sbjct: 105 EFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDT 164
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
SGE K + ++ ++VKKHS+FI YPI L EK EK++
Sbjct: 165 SGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEI 219
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 21 IINTFYSNKEIFLRELISNSSDALDK 46
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 677 TAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCSDDE 856
T+ LGRGTKI L++K+D E++EE + K + ++ S W +K +K SDDE
Sbjct: 164 TSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDE 223
Query: 857 PEXXXKEXE 883
E K+ E
Sbjct: 224 DEEEKKDAE 232
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 194 AEVETFAFQAEIAQLMS 244
+E ETFAFQAEI QL+S
Sbjct: 3 SETETFAFQAEINQLLS 19
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 216 bits (528), Expect = 2e-56
Identities = 109/175 (62%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 45 DKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTK 104
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 678
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R
Sbjct: 105 EFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDT 164
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
SGE K + ++ ++VKKHS+FI YPI L EK EK++
Sbjct: 165 SGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEI 219
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 21 IINTFYSNKEIFLRELISNSSDALDK 46
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 677 TAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCSDDE 856
T+ LGRGTKI L++K+D E++EE + K + ++ S W +K +K SDDE
Sbjct: 164 TSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDE 223
Query: 857 PEXXXKEXE 883
E K+ E
Sbjct: 224 DEEEKKDAE 232
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 194 AEVETFAFQAEIAQLMS 244
+E ETFAFQAEI QL+S
Sbjct: 3 SETETFAFQAEINQLLS 19
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 216 bits (528), Expect = 2e-56
Identities = 109/175 (62%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK
Sbjct: 45 DKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTK 104
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 678
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R
Sbjct: 105 EFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDT 164
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
SGE K + ++ +++KKHS+FI YPI L EK EK++
Sbjct: 165 SGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLWTEKTTEKEI 219
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 21 IINTFYSNKEIFLRELISNSSDALDK 46
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 677 TAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCSDDE 856
T+ LGRGTKI L++K+D E++EE + K + ++ S W +K +K SDDE
Sbjct: 164 TSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLWTEKTTEKEISDDE 223
Query: 857 PEXXXKEXE 883
E K+ E
Sbjct: 224 DEEEKKDAE 232
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 194 AEVETFAFQAEIAQLMS 244
+E ETFAFQAEI QL+S
Sbjct: 3 SETETFAFQAEINQLLS 19
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 212 bits (518), Expect = 3e-55
Identities = 107/175 (61%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 52 DKIRFESLTDKSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTK 111
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD- 678
FMEALQAGAD+SMIGQFGVGFYS+YLVA++V V +KHNDDEQYVWES AGGSFTV D
Sbjct: 112 EFMEALQAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDT 171
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
+GE K + ++ ++VKKHS+FI YPI L EK EK++
Sbjct: 172 AGERLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLWSEKTTEKEI 226
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 28 IINTFYSNKEIFLRELISNSSDALDK 53
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 182 ETQPAEVETFAFQAEIAQLMS 244
+ Q AE ETFAFQAEI QL+S
Sbjct: 6 DVQMAEKETFAFQAEINQLLS 26
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 162 bits (394), Expect = 3e-40
Identities = 86/172 (50%), Positives = 114/172 (66%), Gaps = 3/172 (1%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSG 495
+KIR+ +LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSG
Sbjct: 144 DKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSG 203
Query: 496 TKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRP 675
T AF+E +Q G D+++IGQFGVGFYS YLVAD V V SKHNDD+Q+VWES A GSF +
Sbjct: 204 TSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISE 263
Query: 676 DSGEPPWSRYKDRPSRQRGLGRIH-GRTQIXEIVKKHSQFIGYPIKLMVEKE 828
D+ P R + R + + ++ ++VKK+S+FI +PI L KE
Sbjct: 264 DTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYLWATKE 315
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IIN+ YSNK+IFLRELISN+SDAL++
Sbjct: 120 IINSLYSNKDIFLRELISNASDALDK 145
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 137 bits (332), Expect = 1e-32
Identities = 81/184 (44%), Positives = 116/184 (63%), Gaps = 10/184 (5%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+K+RY S+TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT
Sbjct: 392 DKLRYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTA 451
Query: 502 AFMEAL----QAGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSA-GGSF 663
F++AL +AG D ++IGQFGVGFYS++LV+D+V V +K D+QYVWE A S+
Sbjct: 452 KFLKALKESQEAGVDSNLIGQFGVGFYSAFLVSDKVAVSTKSPKSDKQYVWEGEAESSSY 511
Query: 664 TVR----PDSGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKER 831
T+R P+ P +R R+ G H +I ++VK +SQF+ +PI EK
Sbjct: 512 TIREETDPEKLLPRGTRLTLYLKRE-DKGFAHPE-KIQKLVKNYSQFVSFPIYTWQEKGY 569
Query: 832 EKKL 843
K++
Sbjct: 570 TKEV 573
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/26 (65%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
I+++ YSNKE+FLREL+SN+SDAL++
Sbjct: 368 IVHSLYSNKEVFLRELVSNASDALDK 393
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 128 bits (309), Expect = 6e-30
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+K+R+ +TD S L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT
Sbjct: 381 DKLRFLGVTDSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTS 440
Query: 502 AFMEALQ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSAGGSFT 666
F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVWE A S
Sbjct: 441 KFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWEGVADSSSY 500
Query: 667 VRPDSGEPPWSRYKDRP----SRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKER 831
V + +P + R +I +VK +SQF+ +PI EK R
Sbjct: 501 VIKEETDPEKMLTRGTQITLVLRPDDKFEFADPGRIQGLVKNYSQFVSFPIYTWQEKSR 559
Score = 41.5 bits (93), Expect = 9e-04
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
I+++ YS+KE+FLREL+SN+SDAL++
Sbjct: 357 IVHSLYSHKEVFLRELVSNASDALDK 382
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 120 bits (288), Expect = 2e-27
Identities = 78/188 (41%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNL 474
+K+R+ S+TD S L G EL I+I P+ GT+TI DTGIGMTK +L + L
Sbjct: 122 DKLRFLSVTDSSVLSDGGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCL 181
Query: 475 GTIAKSGTKAFMEALQA----GADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVW 639
GTIA+SGT F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVW
Sbjct: 182 GTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKADKQYVW 241
Query: 640 ESSAGGSFTVRPDSGEPPWSRYKDRP----SRQRGLGRIHGRTQIXEIVKKHSQFIGYPI 807
E+ A S V + +P + R +I +VK +SQF+ +PI
Sbjct: 242 EAMADSSSYVIKEETDPEKMLTRGTQITLFLRDDDKYEFADPGRIQGLVKNYSQFVSFPI 301
Query: 808 KLMVEKER 831
EK R
Sbjct: 302 YTWQEKSR 309
Score = 41.5 bits (93), Expect = 9e-04
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
I+++ YS+KE+FLREL+SN+SDAL++
Sbjct: 98 IVHSLYSHKEVFLRELVSNASDALDK 123
>03_06_0406 -
33703767-33704045,33705167-33705226,33705295-33705378,
33705991-33706093,33706427-33706487,33706993-33707026
Length = 206
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 659 RSQSAQTAVSPLG--RGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNA 832
+S++ Q A P G R LHVKE+L + E+ +R+ +P + + W+++
Sbjct: 123 KSKTHQDACCPEGMCRAAVFALHVKEELDSWPEQSTRRRTWLTVPEATSQCRYQWMQEAL 182
Query: 833 KKNCSD 850
SD
Sbjct: 183 LTGFSD 188
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 427 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVG 564
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVG 150
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 375 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 542
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>03_01_0149 -
1175689-1176258,1176345-1176509,1176631-1177539,
1178179-1178378,1178505-1178605,1178747-1179369,
1179451-1179546,1179637-1179798,1179889-1180068,
1180173-1180323,1180408-1180641,1180753-1180913,
1181041-1181163,1181261-1181421,1181655-1181877,
1181952-1182346,1182461-1182671,1183536-1184522
Length = 1883
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +1
Query: 589 DRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPPWSRYKDRPSRQRG 732
DRV H H + + WE GG R + E R R Q G
Sbjct: 194 DRVRKHEHHRREARGFWERDRGGKMVFRSGTWEQESDREAKRARTQDG 241
>01_06_0580 - 30380260-30380747,30380816-30381107
Length = 259
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 592 RVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPPW 696
RV H DE+Y +SSA G R + EP W
Sbjct: 194 RVRAELVHGRDERYKIDSSAQGLKGARVEMDEPEW 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,326,835
Number of Sequences: 37544
Number of extensions: 529787
Number of successful extensions: 1295
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -