Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_B04
(887 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 221 4e-58
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 221 4e-58
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 221 5e-58
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 220 9e-58
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 166 2e-41
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 166 2e-41
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 142 3e-34
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 142 3e-34
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 131 7e-31
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 33 0.33
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 31 1.4
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 28 7.2
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 221 bits (541), Expect = 4e-58
Identities = 113/175 (64%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK
Sbjct: 44 DKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTK 103
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 678
FMEAL AGAD+SMIGQFGVGFYS+YLVAD+V V +KHNDDEQYVWES AGGSFTV R
Sbjct: 104 EFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDT 163
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
SGE K + ++ ++VKKHS+FI YPI L +EK EK++
Sbjct: 164 SGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKTIEKEI 218
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 677 TAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCSDDE 856
T+ LGRGTK+VL++KED E++EE + K + ++ S W++K +K SDDE
Sbjct: 163 TSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDE 222
Query: 857 PEXXXKEXE 883
E K+ E
Sbjct: 223 EEEEKKDEE 231
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 20 IINTFYSNKEIFLRELISNSSDALDK 45
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 194 AEVETFAFQAEIAQLMS 244
A+ ETFAFQAEI QL+S
Sbjct: 2 ADAETFAFQAEINQLLS 18
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 221 bits (541), Expect = 4e-58
Identities = 113/175 (64%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK
Sbjct: 44 DKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTK 103
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 678
FMEAL AGAD+SMIGQFGVGFYS+YLVAD+V V +KHNDDEQYVWES AGGSFTV R
Sbjct: 104 EFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDT 163
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
SGE K + ++ ++VKKHS+FI YPI L +EK EK++
Sbjct: 164 SGEALGRGTKMILYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKTIEKEI 218
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +2
Query: 677 TAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCSDDE 856
T+ LGRGTK++L++KED E++EE + K + ++ S W++K +K SDDE
Sbjct: 163 TSGEALGRGTKMILYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDE 222
Query: 857 PEXXXKEXE 883
E K+ E
Sbjct: 223 EEEEKKDEE 231
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 20 IINTFYSNKEIFLRELISNSSDALDK 45
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 194 AEVETFAFQAEIAQLMS 244
A+ ETFAFQAEI QL+S
Sbjct: 2 ADAETFAFQAEINQLLS 18
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 221 bits (540), Expect = 5e-58
Identities = 113/175 (64%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK
Sbjct: 44 DKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTK 103
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 678
FMEAL AGAD+SMIGQFGVGFYS+YLVAD+V V +KHNDDEQYVWES AGGSFTV R
Sbjct: 104 EFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDT 163
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
SGE K + ++ ++VKKHS+FI YPI L +EK EK++
Sbjct: 164 SGETLGRGTKMVLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWIEKTIEKEI 218
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 677 TAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCSDDE 856
T+ LGRGTK+VL++KED E++EE + K + ++ S W++K +K SDDE
Sbjct: 163 TSGETLGRGTKMVLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDE 222
Query: 857 PEXXXKEXE 883
E K+ E
Sbjct: 223 EEEEKKDEE 231
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 20 IINTFYSNKEIFLRELISNSSDALDK 45
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 194 AEVETFAFQAEIAQLMS 244
A+ ETFAFQAEI QL+S
Sbjct: 2 ADAETFAFQAEINQLLS 18
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 220 bits (538), Expect = 9e-58
Identities = 110/175 (62%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+KIR+ESLTD SKLD EL+I+++P+K+ TL+IID+GIGMTKADLVNNLGTIA+SGTK
Sbjct: 49 DKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTK 108
Query: 502 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD- 678
FMEALQAGAD+SMIGQFGVGFYS+YLVA++V V +KHNDDEQYVWES AGGSFTV D
Sbjct: 109 EFMEALQAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDV 168
Query: 679 SGEPPWSRYKDRPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
GEP K + ++ ++VKKHS+FI YPI L EK EK++
Sbjct: 169 DGEPLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLWTEKTTEKEI 223
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 25 IINTFYSNKEIFLRELISNSSDALDK 50
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 182 ETQPAEVETFAFQAEIAQLMS 244
+ Q A+ ETFAFQAEI QL+S
Sbjct: 3 DVQMADAETFAFQAEINQLLS 23
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 166 bits (403), Expect = 2e-41
Identities = 87/177 (49%), Positives = 117/177 (66%), Gaps = 3/177 (1%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSG 495
+KIR+ +LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSG
Sbjct: 116 DKIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSG 175
Query: 496 TKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRP 675
T AF+E +Q+ D+++IGQFGVGFYS+YLVAD + V SKHNDD QYVWES A G F V
Sbjct: 176 TSAFVEKMQSSGDLNLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKANGKFAVSE 235
Query: 676 DSGEPPWSRYKD-RPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
D+ P R + R + G +++ E+VK++S+FI +PI L KE E ++
Sbjct: 236 DTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWASKEVETEV 292
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IIN+ YSNK+IFLRELISN+SDAL++
Sbjct: 92 IINSLYSNKDIFLRELISNASDALDK 117
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +2
Query: 668 SAQTAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCS 847
S T PLGRGT+I LH++++ E++EE K K + + S W K +
Sbjct: 234 SEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWASKEVETEVP 293
Query: 848 DDEPEXXXKEXE 883
+E E +E E
Sbjct: 294 VEEDESADEETE 305
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 166 bits (403), Expect = 2e-41
Identities = 87/177 (49%), Positives = 117/177 (66%), Gaps = 3/177 (1%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSG 495
+KIR+ +LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSG
Sbjct: 116 DKIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSG 175
Query: 496 TKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRP 675
T AF+E +Q+ D+++IGQFGVGFYS+YLVAD + V SKHNDD QYVWES A G F V
Sbjct: 176 TSAFVEKMQSSGDLNLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKANGKFAVSE 235
Query: 676 DSGEPPWSRYKD-RPSRQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREKKL 843
D+ P R + R + G +++ E+VK++S+FI +PI L KE E ++
Sbjct: 236 DTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWASKEVETEV 292
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
IIN+ YSNK+IFLRELISN+SDAL++
Sbjct: 92 IINSLYSNKDIFLRELISNASDALDK 117
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +2
Query: 668 SAQTAVSPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCS 847
S T PLGRGT+I LH++++ E++EE K K + + S W K +
Sbjct: 234 SEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWASKEVETEVP 293
Query: 848 DDEPEXXXKEXE 883
+E E +E E
Sbjct: 294 VEEDESADEETE 305
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 142 bits (344), Expect = 3e-34
Identities = 80/179 (44%), Positives = 116/179 (64%), Gaps = 9/179 (5%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+K+R+ S+T+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT
Sbjct: 116 DKLRFLSVTEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTS 175
Query: 502 AFMEALQ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSA-GGSF 663
F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVWES A S+
Sbjct: 176 KFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWESVADSSSY 235
Query: 664 TVRPDSGEPPWSRYKDRPS---RQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKER 831
+R ++ R + + R+ T+I +VK +SQF+G+PI EK R
Sbjct: 236 LIREETDPDNILRRGTQITLYLREDDKYEFAESTRIKNLVKNYSQFVGFPIYTWQEKSR 294
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
I+++ YS+KE+FLREL+SN+SDAL++
Sbjct: 92 IVHSLYSHKEVFLRELVSNASDALDK 117
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 142 bits (344), Expect = 3e-34
Identities = 80/179 (44%), Positives = 116/179 (64%), Gaps = 9/179 (5%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+K+R+ S+T+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT
Sbjct: 116 DKLRFLSVTEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTS 175
Query: 502 AFMEALQ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSA-GGSF 663
F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVWES A S+
Sbjct: 176 KFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWESVADSSSY 235
Query: 664 TVRPDSGEPPWSRYKDRPS---RQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKER 831
+R ++ R + + R+ T+I +VK +SQF+G+PI EK R
Sbjct: 236 LIREETDPDNILRRGTQITLYLREDDKYEFAESTRIKNLVKNYSQFVGFPIYTWQEKSR 294
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
I+++ YS+KE+FLREL+SN+SDAL++
Sbjct: 92 IVHSLYSHKEVFLRELVSNASDALDK 117
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 131 bits (316), Expect = 7e-31
Identities = 76/182 (41%), Positives = 112/182 (61%), Gaps = 8/182 (4%)
Frame = +1
Query: 322 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 501
+K+RY S+T+P +L I+I +K G +T+ D+GIGMT+ +LV+ LGTIA+SGT
Sbjct: 134 DKLRYLSVTNPELSKDAPDLDIRIYADKENGIITLTDSGIGMTRQELVDCLGTIAQSGTA 193
Query: 502 AFMEALQ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSA-GGSF 663
FM+AL+ AG D ++IGQFGVGFYS++LVADRV V +K D+QYVWE A SF
Sbjct: 194 KFMKALKDSKDAGGDNNLIGQFGVGFYSAFLVADRVIVSTKSPKSDKQYVWEGEANSSSF 253
Query: 664 TVRPDSGEPPWSRYKDRPS--RQRGLGRIHGRTQIXEIVKKHSQFIGYPIKLMVEKEREK 837
T++ D+ R + ++ +I ++VK +SQF+ +PI EK K
Sbjct: 254 TIQEDTDPQSLIPRGTRITLHLKQEAKNFADPERIQKLVKNYSQFVSFPIYTWQEKGYTK 313
Query: 838 KL 843
++
Sbjct: 314 EV 315
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +3
Query: 249 IINTFYSNKEIFLRELISNSSDALEQ 326
I+N+ YSNKE+FLRELISN+SDAL++
Sbjct: 110 IVNSLYSNKEVFLRELISNASDALDK 135
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 686 SPLGRGTKIVLHVKEDLAEFMEEPKSKRS*RNIPSSLATQSS*WLKKNAKKNCS-DDEPE 862
S + RGT+I LH+K++ F + + ++ +N ++ W +K K +D+P
Sbjct: 263 SLIPRGTRITLHLKQEAKNFADPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVEDDPT 322
Query: 863 XXXKEXE 883
K+ +
Sbjct: 323 ETKKDDQ 329
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 670 RPDSGEPPWSRYKDRPSRQRG 732
RPD+ P WS+ DR SR+RG
Sbjct: 422 RPDTSSPDWSKRNDRRSRERG 442
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 435 GIDDRKSALVLVGNDLDVQLFATIEF*RIRE-RFIPDF-VLKRPMNWKSAH 289
G DD K + +G+D D + + R +++ D V+ PMNWKS H
Sbjct: 938 GTDDNKQ-MYCIGHDADTSTYQAVHINREPNMKWLKDVDVVYAPMNWKSEH 987
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 310 DELEISSRRKISLLE*KVLMXQGHKLSD--LSLEREGFNLRWLCLHFFRHFLY 158
D++E+ +++LL + L K+S+ L LE +G RW H HF +
Sbjct: 540 DKIEVGEMLQVALLCTQYLPAHRPKMSEVVLMLEGDGLAERWAASHNHSHFYH 592
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,832,773
Number of Sequences: 28952
Number of extensions: 418042
Number of successful extensions: 1120
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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